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Detailed information on CNT30173126


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691007Trifolium pratenseOryza sativa6.5225.7785.8792forward
CNT30730430Trifolium pratenseCorchorus capsularis7.1625.8388.12101reverse complement
CNT30198768Trifolium pratensePisum sativum7.1620.491.09101forward
CNT30191576Trifolium pratenseSecale cereale6.5223.4785.8792forward
CNT30297822Trifolium pratenseTriticum aestivum6.5222.3385.8792forward
CNT3017923Trifolium pratenseZea mays6.953586.7398reverse complement
CNT30550344Trifolium pratenseOryza brachyantha4.3926.3887.162forward

Expression of CNT30173126

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQSYRIFYYFFVKNCLPRSNCGYFFFNLQ*

>peptide 2 (31 aa)
MTGISCCSKGILWIQSFYKYELSPFSGLELV*

>peptide 3 (44 aa)
MRYGYNFNDMQFPQHIKKGYEVFSRLRIIHYCVGSLYVIIVISL*

>peptide 4 (34 aa)
MDKLTLTRQFQIQLEIFFGRYWEGIGIISNNILN*

>peptide 5 (38 aa)
GTCWDPTEKLSCAAPSHPVPAELRSALLHRDPTGIARD*

>peptide 6 (44 aa)
WEPAGIPPRSLAAPLHPIPSRQSSAPLCSTGIPLGSPGIDYHGI*

Sequence

>CNT30173126
TGGGAACCTGCTGGGATCCCACCGAGAAGCTTAGCTGCGCCGCTCCATCCCATCCCGTCCCGGCAGAGCTCCGCTCCGCTCTGCTCCACCGGGATCCCAC
TGGGATCGCCCGGGATTGACTACCATGGTATCTGATTGAATAGAGTAGGGGTAGGGAAGTTTTGGATATTCAATTCCAGTTTAGTAGTTATTGGGGAGAG
GGTAGGCTCTCAAACGCCACAGTCTGTCAATTATTTTTCATTCCTATATCAATTATTAGAGGGTAGGCTCTCAGACACCTAATTAGCTTACACTTAAATG
ATGGATGTGTGCATAGAAGGCAATGACAGATGTCAACTGTTGTGACATATGCATTGCTGCCATTATCTTAGTTCCAATATCAATTATTAGAAGTTATTAA
TTTTGTTTATCATGTCACATGACAGGTATTTCCTGTTGCTCAAAAGGAATTTTGTGGATTCAATCCTTTTACAAGTATGAACTCTCTCCCTTCTCTGGTC
TTGAACTTGTTTGAGCGAGCTTGAATACCCACTTTTTCCTTTATTCCTCGTATCTCTTCCTTTAATTCAAAGGGTGCATAACTGCATGGATAAGCTCACA
CTAACCCGTCAATTTCAGATCCAATTGGAGATTTTCTTTGGGAGGTATTGGGAAGGAATTGGAATAATATCAAACAATATACTAAACTGACGTGTTCATG
TTGTGCAGCATTTGTGTGCTATAGAATTATTTTATAATCTGAGGTTCTACACAAACTTATAAGCTATGAGGTTTGTTACATCTCTCACTCTTCATTCTCA
AACATAGGAAATTCACACAAAGGTTTAAGTTATTGACATCTATCTAGTCTCTTTTTAATCCACACAAAGGCTTTACAAAATGCTGCTTATAAAGCCGATT
GGTATGTTCTCTATATAGTGTGCAGTATGTCACAATCTACAGAAGTTGTTCATGAGGTACGGTTACAATTTTAATGATATGCAGTTTCCCCAACACATTA
AGAAGGGATATGAAGTTTTTTCAAGACTTAGAATAATTCATTATTGTGTTGGTTCTCTCTATGTTATAATTGTAATTAGTTTGTAGTTAGTTACTTATTT
CTTCATGAGTGATATTACCCCTTAAATTAGTTTGTAAATTTATTCTTATGTAATTTAAATTGGGGAAAATAAATTACTCTCATTTGGATATTTGGTTGAC
AAATGCAAAGCTACCGTATTTTTTATTATTTTTTTGTAAAGAATTGTTTGCCACGATCTAATTGTGGCTATTTTTTTTTTAATTTACAGTAACACTTCTT
AGGTCGGTTAAACCTTTAACTGACTTAAGAAGTCAGTTTTTAAGTCAGGTCAAAATCTGACTTAAGAACTTCAAACTTCTTATGTCGCCTTTTCTTAAGT
CAGGTATGGAC