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Detailed information on CNT30172901


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201082Trifolium pratensePisum sativum14.9722.8889.63135reverse complement
CNT30283377Trifolium pratenseTriticum aestivum10.0920.3686.8191reverse complement
CNT30226496Trifolium pratenseHordeum vulgare10.8642.2484.6998reverse complement

Expression of CNT30172901

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSQLYVSFNLRQKKKTLVFKVIFFLICINSLFYLDSE*

>peptide 2 (43 aa)
MMAIAICCLYLHLHLHFPLFLSIYNIKSCRLIKVFYRPFYNYF*

Sequence

>CNT30172901
TATATACCCCTTTAATTTGTGGAATTCATTCACATAAAAAAGTAGTAGCTTAGCTAGGTCATGAGCAAGAAGCTAACTCCATAATCCGTCAATGCCATAG
CTTGATGATGGCCATTGCAATATGTTGCCTTTATCTGCATTTGCACCTGCACTTTCCCTTGTTTCTCTCCATCTATAACATAAAATCTTGTCGGTTAATT
AAAGTTTTTTATCGACCATTTTACAACTATTTTTGAAGAGATTCATATTTTGTTTTTTGAAATTATATATGGTCAAACTCTTATCACCGAACCGACACGT
CAGATAATACATGTATATGTAGTATGAGAGACACTCGTGGGTAAGTGCAGATGCATATGCAGGTGAATGCCATGTTGGTTTTAAGATCAACTTCAGTGTC
AATGGACTAGCTGCGCGGCTGCGGTGCCGATCAAAGGCTTGTCAAAGGGATGTGATTTTGCTCGTGAGGGAAATGATATTATCCGTGCAGCTGGCAAATA
GAGTCCTTAATTAGCCGCTGCTTGTGAAGTCTGGAAGGAGATCAAATTTGAATTCCCAACAATGGATACTTTGGAATCCAGTAATTATCATTCGTTCTAT
TAATTGCCATAAAATAGCAGATTTTTAACTCATAAGCAAATCTAGTGTTTAGTCTCATAAGTCCTAGCTCAACTGGCAAAAATATTGAAATTATTAGGCA
GAACGTCGTGACCCGGGTTCGAACCCGGGATGTCACAATTATATGTGAGTTTTAATCTTAGACAAAAAAAAAAAACTCTAGTGTTTAAGGTTATATTTTT
TCTAATCTGCATTAATTCTTTATTTTACCTTGATAGTGAGTAGTGTTCTGTACATGATGTAATGTTTAACTATTTATTTGTTTGAATAAATCAAATACCG
CA