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Detailed information on CNT30172882


BLAST search results

BLAST vs Swiss-Prot:
sp|P33080|AX10A_SOYBN, E-value = 4e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019742Trifolium pratenseCitrullus lanatus21.085.1190.8298forward
CNT30381249Trifolium pratenseManihot esculenta19.7827.6390.2292forward
CNT30525765Trifolium pratensePhaseolus vulgaris35.9121.3889.22167forward
CNT30198235Trifolium pratensePisum sativum52.928.3489.02246forward
CNT3044394Trifolium pratensePrunus dulcis22.3712.8183.65104forward
CNT3090059Trifolium pratenseSolanum tuberosum28.1717.2683.97131forward
CNT30560988Trifolium pratenseActinidia chinensis21.7218.8192.08101forward
CNT3089314Trifolium pratenseVigna radiata37.6319.4288175forward
CNT30645670Trifolium pratenseCannabis sativa26.6724.0885.48124forward
CNT3028532Trifolium pratenseTheobroma cacao21.089.6684.6998forward
CNT30113474Trifolium pratenseFicus carica21.298.3285.8699forward
CNT3051199Trifolium pratenseCucumis sativus21.7225.5790.1101forward

Expression of CNT30172882

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MQENIFSARNCKATHWMIISKFFLCLTQQVLK*

>peptide 2 (32 aa)
MKVGSSMTRGQQTASFPRQRTLQDTPLGYLIL*

Sequence

>CNT30172882
GCTTTAAAGAATTGGGATGACTATTTGACTCTGTTTTTTTGGTTTAGGTTTGACTCTTAGCTAACATACACTTTTATGAAATTCAAAGTAAACAGTTGCC
GTTAATTGCGTGTTATAGCACAACAACTTTGACGAAAAGTCCATGTGAAGAGCACAAAAGTTCATGTGATTATCAGTCACCACCACCTTCTTCAATTATT
GTTGTAGATTTATAGTCCATTGAAGTGAGAAGTGATATGCAAGAAAACATCTTCTCTGCAAGGAATTGTAAGGCCACCCATTGGATGATCATATCCAAAT
TCTTCCTCTGCTTGACTCAACAAGTCTTGAAATGAAGGTTGGTTCAAGTATGACAAGGGGACAACAAACCGCTTCATTTCCTCGCCAACGTACACTGCAA
GATACCCCTTTGGGATATTTGATACTTTAGATGATGTTTGGCTACTGCTAAATGAAGCCCGTCTA