Detailed information on CNT30172563


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698134Trifolium pratenseQuercus lobata33.4312.1880.62227forward
CNT3021623Trifolium pratenseCitrullus lanatus27.9813.9981.05190forward
CNT30712228Trifolium pratenseGlycine max36.9749.3184.06251forward
CNT3084834Trifolium pratenseVigna radiata37.4165.9781.89254forward
CNT30620323Trifolium pratenseCajanus cajan41.2415.6787.14280forward
CNT30726872Trifolium pratenseLupinus angustifolius38.5911.7985.11262forward

Expression of CNT30172563

Peptides detected in this lncRNA

>peptide 1 (45 aa)
QTNFNYQCQYHPYSRVFTAKTPFPSIVHSSIILIKDGKQILSENK*

>peptide 2 (30 aa)
KPISIINVNIIPIVAFLLQRLHFHQLYIVQ*

Sequence

>CNT30172563
GCAAACCAATTTCAATTATCAATGTCAATATCATCCCTATAGTCGCGTTTTTACTGCAAAGACTCCATTTCCATCAATTGTACATAGTTCAATAATTCTA
ATAAAAGACGGAAAACAAATATTATCAGAAAACAAATGAAAAACATAAGAGAGTATTTAACTTAACATTGTAGTAACAAAATGAGATTCATAAAATACAA
CATGTACATCCATCATCTCATTAGCACACAAAAGCATTAGAAATTAAGAGAGTAATTATTTTTTTTTTACTTGACAAAGTATGGAAGATCCAAAACATAA
AGAAGGAAGTAAGCCCAAGTAACACCAGAAATGCCTCCAAAGAAAAACCCACCAGTGAACTTGGCCCAACCATCAGCTGTTTGAAGCGGATCGGGCTGCT
TCTTACGGCCCGTTAAGGTCAATGATGGTGCGGTCGATGGATCGCCTTCGTTGAAGGAAGAAATCCCGTAGATTGTTAGGGTAAGGCTAAGGATAACAAC
AAGCCCGGCAGCTGCGAGAGAGCCCGCTGATCCAGCATATTCGGTGTTCCTTAGAGGAGGAACCCATGAGCTAAGCCCACTTCGATGCCACGAAGTAGTG
GGTTGACTGCAGTTCTATAGGCTGGTAGGTTGGAGAGGTACCATGCCACCAATGGGCTTGATGTGACTGGAGTTTCAAG