Detailed information on CNT30172422


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616204Trifolium pratenseSesamum indicum24.6818.7185.978forward
CNT30727469Trifolium pratenseCorchorus capsularis21.8422.791.369forward
CNT3069056Trifolium pratenseQuercus suber40.8212.285.27129forward
CNT30402231Trifolium pratenseBeta vulgaris34.8135.685.45110forward
CNT30526769Trifolium pratensePhaseolus vulgaris47.7851.3687.42151forward
CNT30629861Trifolium pratenseVigna unguiculata45.8930.5985.52145forward
CNT30563209Trifolium pratenseActinidia chinensis23.121.7390.4173reverse complement
CNT30623923Trifolium pratenseDaucus carota20.2521.0587.564forward
CNT30620685Trifolium pratenseCajanus cajan52.8517.4584.43167forward
CNT3029924Trifolium pratenseTheobroma cacao35.1336.0485.59111forward
CNT30120686Trifolium pratenseCitrus clementina21.8422.9288.4169reverse complement
CNT30174902Trifolium pratenseVigna angularis44.6246.2385.82141forward

Expression of CNT30172422

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSWVAPTCNLSGGIKVMEHSFGLSGWSGGCTMLACPLQVWS*

Sequence

>CNT30172422
GCCGAGTTGGGTAGCTCCAACTTGTAACCTAAGTGGGGGCATTAAGGTGATGGAACATAGCTTTGGCTTGTCAGGTTGGTCTGGAGGGTGCACTATGTTG
GCCTGCCCACTCCAAGTTTGGAGTTGAATCATGGGACTTGGGCGAAAGCTTGGGTCTCTTGTCTCTTAGACTGGAGGGCACAGCGTGAGGCTGGTTTCAC
AGAGCAGCGAACACCTCCTTCTCCTAACAGTGGAGGGATCACAAGCCACAGCATTCCCGGTCNNNNNNNNNNNNNNCAAAAAGCCTGGTGAGCTAAGCCA
TTGAACCATCATTTTT