Detailed information on CNT30172405


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316252Trifolium pratenseCorylus avellana35.2422.687.580reverse complement
CNT30541676Trifolium pratenseBrassica napus29.5221.9794.0367forward
CNT30145967Trifolium pratenseMedicago truncatula44.4934.3593.07101forward
CNT30654098Trifolium pratenseRosa chinensis24.2317.7492.7355forward
CNT30623316Trifolium pratenseDaucus carota31.2823.3687.3271forward
CNT3024632Trifolium pratensePopulus trichocarpa33.0424.758875forward
CNT30175714Trifolium pratenseVigna angularis43.1732.2489.898forward
CNT30725324Trifolium pratenseLupinus angustifolius37.4442.2991.7685forward

Expression of CNT30172405

Peptides detected in this lncRNA

>peptide 1 (74 aa)
YGLLSWVGSCNMLACTLQVGKAWAKAWAKAWVSLFLDKRALREAGFTEQRTPLALDGGGITGCSTFSPLSLVSLA

Sequence

>CNT30172405
GCTATGGTTTGTTGAGCTGGGTTGGTAGCTGCAATATGCTGGCCTGCACGCTCCAAGTTGGCAAAGCTTGGGCCAAAGCTTGGGCCAAAGCTTGGGTCTC
TTTGTTCCTAGACAAGAGGGCACTGCGTGAGGCTGGTTTCACAGAGCAGCGAACACCTCTGGCTCTTGACGGTGGAGGGATAACAGGCTGTAGCACTTTC
AGCCCATTAAGCTTGGTGAGCCTAGCC