Detailed information on CNT30172294


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379183Trifolium pratenseManihot esculenta52.6951.7682.99147reverse complement
CNT30526811Trifolium pratensePhaseolus vulgaris27.625.0892.2177forward
CNT30709392Trifolium pratenseGlycine max29.0326.7392.5981forward
CNT30143824Trifolium pratenseMedicago truncatula74.1968.5485.99207forward
CNT30213128Trifolium pratenseHelianthus annuus52.6947.8882.31147forward
CNT30354850Trifolium pratenseLactuca sativa38.3513.4484.11107forward
CNT30334668Trifolium pratenseCynara cardunculus22.5810.6188.8963forward

Expression of CNT30172294

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MEQGCVGSCNLLACLLQVESWTMRLGRRFGSLVS*

Sequence

>CNT30172294
GTATTTTAAGTACATTTAAATTATTGTATCAAAGTGATGGAACAAGGCTGTGTTGGTAGCTGCAATTTGCTGGCCTGCCTGCTCCAAGTTGAAAGTTGGA
CCATGAGACTTGGGCGAAGGTTTGGGTCTCTCGTTTCCTAGACAAGAGGGCACTGCGTTAGGCTGGTTTCACAGAGCAGCGAACACCTCTGGCTCCCAAC
AGTGGAGGGATAACAGAGGCTGCTGCACTACCAGCCCACTAAGCCTGGTGGGCCTAGCCTTTGGATGGTCATCATTTTT