Detailed information on CNT30171945


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700605Trifolium pratenseQuercus lobata58.9631.4782.28158forward
CNT30619930Trifolium pratenseCajanus cajan56.3425.1288.08151reverse complement

Expression of CNT30171945

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MWAESTTACYPSTVKSKRCSLLCETSLMRFPPF*

>peptide 2 (69 aa)
KVMVQCAKPIRLCGLRVQQPVIPPLSRARGVHCSVKPASCGSLHSRDQENRAFAQIPWPNSRLGAGRPE*

>peptide 3 (31 aa)
MAQLSTWSGQARIEYNSTQPNEPKPCPITLLP

Sequence

>CNT30171945
AAAAGTGATGGTTCAATGTGCTAAGCCCATCAGGCTATGTGGGCTGAGAGTACAACAGCCTGTTATCCCTCCACTGTCAAGAGCAAGAGGTGTTCACTGC
TCTGTGAAACCAGCCTCATGCGGTTCCCTCCATTCTAGAGACCAGGAGAACCGGGCCTTCGCCCAAATCCCATGGCCCAACTCTCGACTTGGAGCGGGCA
GGCCAGAATAGAGTACAACTCAACCCAGCCCAATGAACCAAAGCCATGTCCCATCACATTATTGCCCC