Detailed information on CNT30171686


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071844Trifolium pratenseQuercus suber15.8220.1483.19119forward
CNT3090473Trifolium pratenseSolanum tuberosum13.721.3786.41103forward
CNT30508399Trifolium pratenseSolanum lycopersicum17.0260.3882.81128forward
CNT30570130Trifolium pratenseVitis vinifera10.1124.684.2176forward
CNT30174821Trifolium pratenseVigna angularis28.3217.2286.38213forward

Expression of CNT30171686

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGITNRFCFSPTYTARYPFGISTAFDAVRFATSDARLMIPEKRK

>peptide 2 (44 aa)
MVGSSMIRGSQISFVSLPHTLQDIPLARPLLLKLSGLQKMMMTF*

>peptide 3 (38 aa)
MLKDIFCARNGETTHGMIVFKLFLRLTQQVLKRWLVQV*

>peptide 4 (43 aa)
MVGSSMIWGSQIAFVSLQHTLQDIPSAFPPLLMLFGLPRVMPV*

>peptide 5 (60 aa)
LLDHPLDDRIQILLLLDIVILEMKVDSRMKWESQTASFCLRHKPQDSLLGLHPQPLKMTF*

Sequence

>CNT30171686
TTGTTAGACCACCCATTGGATGATCGTATCCAAATTCTTCTTCTGCTTGACATAGTAATTCTTGAAATGAAGGTTGATTCAAGAATGAAATGGGAATCAC
AAACCGCTTCATTTTGTCTCCGACATAAACCACAAGATAGCCTTTTGGGACTTCATCCACAACCTTTGAAGATGACTTTCTAATACCAGATTCATGCCAC
ACTTCATAGCTCATTCAAGCAAGAAGTTATATTTTGGAAGAAATCTTCGGTGCAAGGAATGGTGAGGCCACCCATCGGATGATCATATCCAAACTCTTCC
TCAGCTTGACTCAATAAGTCTTGAAACAATGGTTGGTTCAAGTATGATACGGGGATCACAAATCTCTTTTGTTTCTCTCCCACATACACTGCAAGATATC
CCTTTGGCGCGTCCACTACTTTTGAAACTGTCCGGTTTGCAGAAAATGATGATGACCTTCTAATGATACCAGATTCATAGTCCATTGAAGCGAGATGTTA
TATGTTGAAAGACATCTTCTGTGCAAGGAATGGTGAGACCACCCATGGGATGATTGTATTCAAACTCTTCCTCCGCTTGACTCAACAAGTCTTGAAACGA
TGGTTGGTTCAAGTATGATATGGGGATCACAAATCGCTTTTGTTTCTCTCCAACATACACTGCAAGATATCCCTTCGGCATTTCCACCGCTTTTGATGCT
GTTCGGTTTGCCACGAGTGATGCCCGTTTAATGATACCAGAGAAGCGAAAAC