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Detailed information on CNT30171655


BLAST search results

BLAST vs Swiss-Prot:
sp|P33083|AX6B_SOYBN, E-value = 1e-42

BLAST vs NONCODE:
NONSLYT000534, E-value = 1e-07

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044400Trifolium pratensePrunus dulcis13.0527.1783100forward
CNT30560986Trifolium pratenseActinidia chinensis20.527.5984.71157forward
CNT3084441Trifolium pratenseVigna radiata25.217.490.16193forward
CNT30620093Trifolium pratenseCajanus cajan37.629.9484.38288forward

Expression of CNT30171655

Peptides detected in this lncRNA

>peptide 1 (64 aa)
VLFSLYSDEYFSKFPMKGDKIYKLKRFLLYKMSLLIYHYCYSFKFIAHSSEKLCVETHLRCKAW*

>peptide 2 (37 aa)
MMVGSNTILGSQIASVSLQHTLQHSPFSLLRILMLFG*

Sequence

>CNT30171655
GTTTTGTTTTCTTTGTATTCAGATGAATATTTTTCTAAATTTCCCATGAAAGGGGATAAAATTTACAAGTTAAAAAGATTCCTATTGTACAAAATGTCTC
TACTAATCTATCATTATTGCTACAGTTTCAAATTCATAGCTCATTCAAGCGAGAAGTTATGTGTTGAAACACATCTTCGGTGCAAGGCATGGTGAGGCCA
CCCATGGGATGATCATAACCAAACTCTTCCTCAGATTGACTCAATAAGTCTTGAAATGATGGTTGGTTCAAATACGATATTGGGATCACAAATCGCTTCT
GTTTCTCTCCAACATACACTGCAACATAGCCCTTTCTCACTTCTGCGGATTTTGATGTTGTTTGGATAGAAGTTAATGATGCCCGTCGAATAACATTTAA
ACGGAAACCCATTTTTGGTGATTGTTTGAGGGAGAAGAAAAGACTCAACAGAGCAAAGATATCAAAAAAAGCTTTAGAAGGATGTAACTAACACTTCAGG
AAGCCAATGACAATTGTGTTGTCCCTTTCTCACTTCTGTAGATTTTGATGCTGTTTGGTTGGCAGTTAATGATGCCCGTCGAATAACATTTAATCGGAAA
CCCATTTTTGGTGATTTTTTGAAGGAGAATATAAAAGACACAACAGAGAAAAGATATAAAAAACTTTAGAAGGATTTAACTAACACTTTGATGATGCCAA
TGAGTTGTGGTGTGTTTGAAGGCAATTTGTAAGTATATTTATAGTTATTTAGGTTCTCTGGAATTC