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Detailed information on CNT30171647


BLAST search results

BLAST vs Swiss-Prot:
sp|P33081|AX15A_SOYBN, E-value = 6e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3084386Trifolium pratenseVigna radiata11.4321.2682.84169forward
CNT30542807Trifolium pratenseBrassica napus3.5225.6292.3152forward
CNT30234281Trifolium pratenseBrassica oleracea3.7924.7889.2956forward

Expression of CNT30171647

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MLLLKRKLSHPHTFAISLAHNINWTHRLKIYGAMNWSYFVKRSTSTPLLGHDGSPKISEGVIALDSI*

>peptide 2 (50 aa)
MGITNLFIFSPTYTATHPFGTASLPLLSPDVRGKNGNVGGAREGWRCKKNS

>peptide 3 (42 aa)
MNFLTYMLFGSTLISFPTFPLNSSYDKNSHVTSIYANANMRS*

>peptide 4 (34 aa)
MKLDSTIQWESQISSSFLQHILQHTLLALLLYLF*

Sequence

>CNT30171647
TAAATTTCCAATACTCGTTGATCAAGTTGGCACATAACATCAACATCAAACAAAGACCATCATGCTTTGTTTTCTAAATAAAAACATGTGCATTCAAAGA
AACTCTAAACCCAAAATGCAAACCCTAACTGAATAAGAACATGTACACAATGTGGAGGACGAATAACACTTACCTCAATTAGTCGTTGATTTCCTCCTTT
TCTTCTATGATTTCATCTTACATAGTTGTTAGGACATGAGGGGAGCCCTACTATACATGGGGATCATTACAATGGACTTTGAGTGATGACTCAAGTGGAA
TTGGACCATCACAACCTCATTCAAATCTTAAGACACTAGATATACGAGTTATCTCACTCATATGTTACTTAACATCTACGTTTTCATTCAATATTGGACT
CTTACACACACTTGACATAGCAACAATCTTCCCTTTAAGCGTGAGCCTATCCAATCATTTGGTATGCTCCTCCTCAAACGAAAATTGTCTCATCCACATA
CGTTTGCAATTTCGTTGGCACATAACATCAACTGGACACATCGTTTGAAGATTTATGGTGCAATGAATTGGTCTTATTTTGTCAAACGATCGACTTCGAC
ACCATTATTAGGACATGATGGGAGTCCTAAAATCTCGGAGGGGGTCATCGCATTGGATTCAATTTGACACTACAAATTAACTTAAAATTTTAAAAATCAT
TAGATATATGAATTTTCTCACTTATATGTTATTCGGTTCCACCCTCATTTCATTTCCCACTTTTCCTCTCAATTCCTCATACGATAAAAATAGCCATGTT
ACATCCATATATGCAAATGCAAATATGAGGAGTTAGATCAACAGTCCAACAGAAATGAAATGACCAAAACTTGTGTTAATATTGTCATGTTAAAGGACAA
AATTGACATTATCCAAATTTAACGGGCCAATTTGCACATAAAAAATAAGTTAAGGAACCAAAAAATTAATTAAGAATTTTTTTTGTGTTCCAAACGTGTG
AGACATCAAACATGCTAAGTCTAACAAAAAAAGGTAGACTCTCACAATAGGATAAATCAACATTCAAATCTCAACTCAACTATGAGATGATTGCTAATCT
ATGAAAAACCAATAAAATTCCTGGAACTGGGATTTTACAAAATTAATATCAGTGTAGTCCCTGCTCAGAATATTGAGAAGCAAGATCAAGTTAGAAGTGA
TATGATATTTAAGAAAATATCTTCACTGCAAGGAATGGTTAAGCCACCCATTGGATGATAGTACCCAAATTCTTCTTCAGCTTTGCTTAACAATTTCTGA
AATGAAGCTTGATTCAACCATCCAATGGGAATCACAAATCTCTTCATCTTTTCTCCAACATATACTGCAACACACCCTTTTGGCACTGCTTCTCTACCTC
TTCTAAGTCCAGATGTGCGGGGTAAGAATGGAAACGTAGGTGGCGCACGAGAAGGGTGGAGGTGCAAAAAAAATTCCCG