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Detailed information on CNT30171644


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710704Trifolium pratenseGlycine max21.7915.0484.62117forward
CNT30145300Trifolium pratenseMedicago truncatula12.8531.6597.169forward
CNT30725421Trifolium pratenseLupinus angustifolius24.5818.0384.85132forward

Expression of CNT30171644

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MAQKKSKQHQIQINVETHSSTGQLLIPRDIIKL*

>peptide 2 (29 aa)
MLRHIQVQDNYSYQEILLSCKVACKDKQK*

Sequence

>CNT30171644
CGAACGGTTCATATTTCACAAAAAATTAGCTTTAACCAATTTTAGCCATTAATTTGAGATCAAATGGTTCAAATATAAACCTAATGGCGCAAAAAAAAAG
TAAACAGCACCAAATCCAAATCAATGTTGAGACACATTCAAGTACAGGACAACTACTCATACCAAGAGATATTATTAAGTTGTAAAGTTGCATGTAAAGA
CAAACAAAAATAGTCTCCACGACTATAAAACATTACACATTTTTGACAAACTAGTCTTCCATTTCCATTCATTCACCATCATTAAATTTTGGTGCTGCTG
ACTAACATAACATTTATCATAATATTCACTACCAACATTTTAGTAAACGTAGCCTTTGACAAATAGTTCCTTCTTGGCTTCCTCAGATTCACCATCACCG
GCATACTTCCCAAGTTGAGCAAGTGAGTTGGACTTGGCGCGGTGAAGGAGTGCTTNNNNNNNNNNNNATGTCTTCAATGCGGTATTTTGGAGAGCTCGTG
CGTATGAAAACGACACGTGCCATGGGTTTGGAGATTT