Detailed information on CNT30171414


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223386Trifolium pratenseHordeum vulgare28.459.786.8799reverse complement
CNT30389925Trifolium pratenseTriticum turgidum28.457.0487.8899reverse complement
CNT30592666Trifolium pratenseMusa acuminata20.987.590.4173reverse complement
CNT30541981Trifolium pratenseBrassica napus31.326.7992.66109forward
CNT30655399Trifolium pratenseRosa chinensis28.4512.3393.9499forward
CNT30207123Trifolium pratenseHelianthus annuus25.5734.7794.3889forward
CNT30683092Trifolium pratenseTriticum urartu28.454.4886.8799reverse complement
CNT30104537Trifolium pratenseOryza rufipogon28.4532.4686.8799forward

Expression of CNT30171414

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MNFIWKPYQERDIHLRSKDCQVSFMLYSGVLLL*

Sequence

>CNT30171414
CCGTGTGATGGTAAACCTTCCTGCACGGTTCAGAGAGCACTGAATTAGAATAAGAGGTTCACCATCACATCATTGCATGCAAGGGGAGCTCGGTCGATTT
GAAAATAGGAACTTGCTTTCATGAATTTTATCTGGAAACCTTATCAAGAACGTGATATACATCTTCGAAGCAAGGATTGCCAAGTAAGCTTCATGTTGTA
TTCAGGGGTTTTATTATTATAATAATAGTTAGAATATAGTTGAAGTTGAATTAAACAAGTTACTTTGTTAGAATAGTTTGCTGAGTCAGTTAGTTGATCA
CTTGATATGTAAGATTTTAATTCAATAGATTGATTATAGTTAGAAGAG