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Detailed information on CNT30171111


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 3e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631005Trifolium pratenseVigna unguiculata21.0726.9782.58178forward
CNT30201619Trifolium pratensePisum sativum31.7232.1786.94268forward
CNT30709371Trifolium pratenseGlycine max28.0537.2180.59237forward
CNT30143877Trifolium pratenseMedicago truncatula31.4846.8392.48266forward

Expression of CNT30171111

Peptides detected in this lncRNA

>peptide 1 (33 aa)
KTWFNNDIYHSVPLIKQLTCSSPINNPKKNNLQ*

>peptide 2 (38 aa)
MTRTFIPHKNKYSIVHIHTVILIKKTTHYSFIKIIVSL*

Sequence

>CNT30171111
TAAAACTTGGTTTAACAATGATATATATCATTCAGTTCCACTAATTAAGCAACTTACATGCTCAAGTCCAATAAATAACCCAAAAAAGAACAATTTACAA
TGAATCAAATTGCATAATTTAAATATGACAAGAACATTCATTCCACATAAAAATAAATACAGTATAGTACACATACACACTGTGATTTTGATAAAAAAAA
CCACACATTATAGTTTTATCAAAATCATAGTATCACTGTAATTTCGTTAAACTCACTTTATTTCGACCGTGCACACAAAATAAGAAAAACAATGAAAGTA
TAGTAACATGAGTACTAAGCATATCCCTTGAAGTACTTTTGACATGATTCTAAGAACATTGGAAACCAGAAGGAACAGATTTTTCACAAGCACTAAGTAG
GAGACTTAGTGTGATAGGAATATTCAAGTTGTTACCAAGAACATTAGCCTTAATGGCAGTACAAAGGCAAAGTGCTGCTTCTGAATCAGCCAAACCTTGA
AGTAATGCACAACACTTGCTTGAAACAGGAGTTCCAACAATAACATTATGTCCTAGAATATCAGCACAAACACCTAGCTTTAATGTGTCTCTAGGACATT
TTTGTGATGTTGGAGGAGTAGGAGTTGGAGGTGATGTTGAAGGAGTGGGAGGAGGAGGAGGAGGACAAGCATTAGGTGATGGCGGTGGTGGGCTAGGCTT
AGGTTTTGGAGTTGGGTTGCATGTACCACAAGCATGAGAAAATGTTGAATAAGCAAGAAGAGAAAACAATATGATTAGTGCACTGAGCTTGTTAGAAGCC
ATAGTCAATTAAGGATGCAAAAATGAAAAGAATGTGACCATTTTT