Detailed information on CNT3017048


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381846Zea maysManihot esculenta19.2221.0589.0664reverse complement

Expression of CNT3017048

Peptides detected in this lncRNA

>peptide 1 (42 aa)
GLPERAHVPQLAYSIATHYPSTAGGGRYSLLCEASLTQCPPL*

>peptide 2 (71 aa)
MSATLGVGMQRLSPRHPKPTTQLGMGGPQFVALDPGTCTTIDIHTTLLPPLGLQAIATCSASEGVQDYLFKV

Sequence

>CNT3017048
GTGGTCTACCAGAGAGGGCACATGTGCCTCAATTGGCCTATAGCATAGCGACTCATTATCCTTCCACCGCTGGTGGCGGGCGATACTCGCTGCTCTGTGA
AGCCAGCCTCACGCAATGTCCGCCACTTTAGGTGTTGGGATGCAAAGGCTTTCGCCAAGGCATCCGAAACCCACTACACAACTTGGAATGGGTGGTCCAC
AGTTTGTAGCACTAGACCCAGGCACATGCACCACAATTGACATCCACACTACCTTATTGCCCCCGCTCGGGTTACAAGCAATCGCTACTTGCTCAGCGAG
TGAGGGGGTTCAAGACTACCTATTTAAGGTGGT