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Detailed information on CNT30169912


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-104

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528977Pistacia veraEucalyptus grandis57.367.9985.62911forward
CNT30315749Pistacia veraCorylus avellana43.0242.1285.53684forward
CNT30526024Pistacia veraPhaseolus vulgaris57.1168.6384.69908forward
CNT30630785Pistacia veraVigna unguiculata42.779.686.45679forward
CNT3089455Pistacia veraVigna radiata56.7374.1884.92902forward
CNT30127456Pistacia veraCorymbia citriodora28.2456.5590.2449forward
CNT3066362Pistacia veraSelaginella moellendorffii57.392.3983.97911forward

Expression of CNT30169912

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

>peptide 2 (60 aa)
RSDGRKHIFIDRITTKPLLPRKHCTLDLTAIREPNRITLSADELYLHTSPTKNTVELPNR*

Sequence

>CNT30169912
AAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACTGCACACTTGACTTGACAGCAATCAGAGAA
CCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCTACCCAACAGATAGAAGGGTTTTCTTCATC
TTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAACACTTTTTAACTGAACCGTTCAACCGAGAA
ACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACTGAAACTGGTCTCAACTTCATGACCAGGAA
ATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCACTTAGAATTCACCACCACGAAGACGGAGG
ACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCAGGTG
GAATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTTATCGTCTTCCCCGTAAGGGTCTTGACGAA
AATCTGCATACCTCCACGAAGCCTCAGCACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCAAGGTTCGTCCGTCTTCTAATTGCTTGCCG
GCGAAGATCAAACGCTGCTGGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGAGTGA
TGGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAA
GGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATC
GTGTCAGAACTCTCGACCTCAAGAGTGATAGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGTGTTG
ACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGTC
TTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAGA
AGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGCC
GACTTGGTGAAGGTTTCGAAGAGAACGCCAATGCGTACTAGAAGGGAAAGGAGTGGTCCAGATGAGTTGGTTTAAAGTTTGCTTACGTAA