CANTATAdb - search

Detailed information on CNT30169911

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-104

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30513431	Pistacia vera	Juglans regia	36.82	70.12	85.21	683	forward
CNT30728102	Pistacia vera	Corchorus capsularis	49.11	60.45	87.05	911	forward
CNT3031793	Pistacia vera	Theobroma cacao	49.11	74.13	85.4	911	forward

Expression of CNT30169911

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MESRLLLNVIVGQGTAVFKLLSGKDQTLLVRWDPLLVLDLGLNIIDGVGALHLKSNGLSREGFNEDLHASTQTEDKVES*

>peptide 2 (40 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTRWRVDSFWML*

Sequence

>CNT30169911
GGGATGGTCATACATAACTAACTTATTTTGCAATTACCTTCTTTCAAGTTTAATTCTATCCTGTACTAATTGGAAACCAATTGAGTAACACCTCCCTTGT
AGGGACCTAATTTTCTCCATCTAACTTTACTAAAGCCATAATACTCTGCAATGATTTTCCTCATCTAAATATGCGAAAGCCATAAATACTGTTAGGCACC
GTACTCTTAATCAAACGAAGCCCACATTTTGAATCATATATAAACCACGAAAGCATTGCGAAAACCAACATTTAAAAGAAGAGAATGTTGGGCAGGTGGA
CTTGATGAAAACACAAAACATCCGGCTTCAAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACT
GCACACTTGACTTGACAGCAATCAGAGAACCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCT
ACCCAACAGATAGAAGGGTTTTCTTCATCTTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAAC
ACTTTTTAACTGAACCGTTCAACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACT
GAAACTGGTCTCAACTTCATGACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCA
CTTAGAATTCACCACCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCC
AGCGAAGATAAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTT
ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATACCTCCACGAAGCCTCAGCACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCA
AGGTACGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTATCGAT
GGTGTCGGAGCTCTCCACCTCAAGAGTAATGGTCTTTCCCGTGAGGGTTTTAACGAAGATTTGCATGCCTCCACGCAGACGGAGGACAAGGTGGAGAGTT
GACTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGGGGGATCCCCTCCTTGT
CCTGGATCTTGGCCTTGACATTATCGATCGTGTCAGAACTCTCGACCTCAAGAGTGATAGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCATGCCTCC
ACGGAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGT
TGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTA
GGGTTTTGACGAAGATCTGCATGTTGAGAAGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGA
GGAAGGGTGTTTATATAAGAGAAAATGCCGACTTGGTGAAGGTTTCGAAGAGAAC