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Detailed information on CNT30169909


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 8e-104

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3086353Pistacia veraVigna radiata47.3340.9784.28878forward

Expression of CNT30169909

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTRWSVDSFWML*

>peptide 2 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

Sequence

>CNT30169909
GGGATGGTCATACATAACTAACTTATTTTGCAATTACCTTCTTTCAAGTTTAATTCTATCCTGTACTAATTGGAAACCAATTGAGTAACACCTCCCTTGT
AGGGACCTAATTTTCTCCATCTAACTTTACTAAAGCCATAATACTCTGCAATGATTTTCCTCATCTAAATATGCGAAAGCCATAAATACTGTTAGGCACC
GTACTCTTAATCAAACGAAGCCCACATTTTGAATCATATATAAACCACGAAAGCATTGCGAAAACCAACATTTAAAAGAAGAGAATGTTGGGCAGGTGGA
CTTGATGAAAACACAAAACATCCGGCTTCAAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACT
GCACACTTGACTTGACAGCAATCAGAGAACCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCT
ACCCAACAGATAGAAGGGTTTTCTTCATCTTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAAC
ACTTTTTAACTGAACCGTTCAACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACT
GAAACTGGTCTCAACTTCATGACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCA
CTTAGAATTCACCACCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCC
AGCGAAGATAAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTT
ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATACCTCCACGAAGCCTCAGCACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCA
AGGTTCGTCCGTCTTCTAATTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGAT
GGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGGGTT
GACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGT
CTTGGATCTTGGCCTTAACATTATCGATGGTGTCGGAGCTCTCCACCTCAAGAGTAATGGTCTTTCCCGTGAGGGTTTTAACGAAGATTTGCATGCCTCC
ACGCAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGT
TGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTA
GGGTTTTGACGAAGATCTGCATGTTGAGAAGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGA
GGAAGGGTGTTTATATAAGAGAAAATGCCGACTTGGTGAAGGTTTCGAAGAGAAC