CANTATAdb - search

Detailed information on CNT30169895

BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 3e-103

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30228911	Pistacia vera	Ananas comosus	51.29	56.26	85.39	876	forward

Expression of CNT30169895

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

>peptide 2 (60 aa)
MESRLLLNVIVGQGTTVLQLLPSKDQTLLIRWNSLLILDLCLHIVYGVRTFHFKGDRLPS*

>peptide 3 (60 aa)
RSDGRKHIFIDRITTKPLLPRKHCTLDLTAIREPNRITLSADELYLHTSPTKNTVELPNR*

>peptide 4 (40 aa)
MVSELSTSRVIVFPVRVLTKICIPPRRRRTRWRVDSFWML*

Sequence

>CNT30169895
AAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACTGCACACTTGACTTGACAGCAATCAGAGAA
CCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCTACCCAACAGATAGAAGGGTTTTCTTCATC
TTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAACACTTTTTAACTGAACCGTTCAACCGAGAA
ACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACTGAAACTGGTCTCAACTTCATGACCAGGAA
ATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCACTTAGAATTCACCACCACGAAGACGGAGG
ACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCAGCAC
CAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCAAGGTACGACCGTCCTCCAATTGCTTCCCAGCAAAGATCAAACGCTGCTGATCCGGTGGA
ATTCCCTCCTTATCTTGGATCTTTGCCTTCACATTGTCTATGGTGTCAGAACTTTCCACTTCAAGGGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGA
TCTGCATACCACCACGGAGACGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCCAAGGTTCGTCCGTCTTCTAATTGCTTGCCGGC
GAAGATCAAACGCTGCTGGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGAGTGATG
GTCTTACCGGTGAGAGTCTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGG
TACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATCGT
GTCAGAACTCTCGACCTCAAGAGTGATAGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGTGTTGAC
TCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGTCTT
GAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAGAAG
ATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGCCGA
CTTGGTGAAGGTTTCGAAGAGAACGCCAATGCGTACTAGAAGGGAAAGGAGTGGTCCAGATGAGTTGGTTTAAAGTTTGCTTACGTAACTGACTACTTTA
TTTGAACG