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Detailed information on CNT30169891


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 2e-152

BLAST vs NONCODE:
NONTPRT002153, E-value = 7e-104

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30171188Pistacia veraTrifolium pratense40.4543.6885.23684forward

Expression of CNT30169891

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

Sequence

>CNT30169891
GGGATGGTCATACATAACTAACTTATTTTGCAATTACCTTCTTTCAAGTTTAATTCTATCCTGTACTAATTGGAAACCAATTGAGTAACACCTCCCTTGT
AGGGACCTAATTTTCTCCATCTAACTTTACTAAAGCCATAATACTCTGCAATGATTTTCCTCATCTAAATATGCGAAAGCCATAAATACTGTTAGGCACC
GTACTCTTAATCAAACGAAGCCCACATTTTGAATCATATATAAACCACGAAAGCATTGCGAAAACCAACATTTAAAAGAAGAGAATGTTGGGCAGGTGGA
CTTGATGAAAACACAAAACATCCGGCTTCAAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACT
GCACACTTGACTTGACAGCAATCAGAGAACCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCT
ACCCAACAGATAGAAGGGTTTTCTTCATCTTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAAC
ACTTTTTAACTGAACCGTTCAACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACT
GAAACTGGTCTCAACTTCATGACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCA
CTTAGAATTCACCACCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCCAAGGTTCGTCCGTCTTCTAATTGCTTGCC
GGCGAAGATCAAACGCTGCTGGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGAGTG
ATGGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCA
AGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGAT
CGTGTCAGAACTCTCGACCTCAAGAGTGATAGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGTGTT
GACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGT
CTTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAG
AAGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGC
CGACTTGGTGAAGGTTTCGAAGAGAACGCCAATGCGTACTAGAAGGGAAAGGAGTGGTCCAGATGAGTTGGTTTAAAGTTTGCTTACGTAA