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Detailed information on CNT30169884


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 3e-156

BLAST vs NONCODE:
NONTPRT002153, E-value = 2e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30636043Pistacia veraCapsicum annuum69.343.7984.36684forward
CNT3087979Pistacia veraVigna radiata69.372.6983.92684forward
CNT3051148Pistacia veraCucumis sativus69.357.3383.92684forward

Expression of CNT30169884

Peptides detected in this lncRNA

>peptide 1 (38 aa)
PRNYYYYSKAKKNTRQRQLLNNGNETETGLNFMTRKYW*

>peptide 2 (40 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTRWSVDSFWML*

>peptide 3 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

Sequence

>CNT30169884
AACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACTGAAACTGGTCTCAACTTCAT
GACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCACTTAGAATTCACCACCACGA
AGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCCAAGGTTCGTCCGTCTTCTAATTGCTTGCCGGCGAAGATCAAACGCTGCT
GGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTACCGGTGAGAGT
CTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCAAGT
TGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTATCGATGGTGTCGGAGCTCTCCACCT
CAAGAGTAATGGTCTTTCCCGTGAGGGTTTTAACGAAGATTTGCATGCCTCCACGCAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATGTTGTA
ATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACG
TTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAGAAGATTGTTGTTGAAACTTG
AAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGCCGACTTG