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Detailed information on CNT30169882


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-108

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Pistacia veraNymphaea colorata55.2657.0983.61140forward
CNT30513419Pistacia veraJuglans regia31.876.6486.28656forward
CNT30379315Pistacia veraManihot esculenta32.2852.7385.89666forward
CNT30712823Pistacia veraGlycine max32.9677.186.18680forward
CNT30635990Pistacia veraCapsicum annuum55.2654.9983.161140forward
CNT30568725Pistacia veraActinidia chinensis54.4896.983.811124forward
CNT30586586Pistacia veraMusa acuminata33.1148.0385.51683forward
CNT30538027Pistacia veraBrassica napus55.2160.0781.471139forward
CNT30312399Pistacia veraCamelina sativa55.2687.2982.631140forward
CNT3077383Pistacia veraBrassica juncea42.5667.7584.05878forward
CNT30264722Pistacia veraBrassica rapa42.5682.9984.05878forward
CNT30608559Pistacia veraGossypium raimondii55.2174.6484.111139forward
CNT30229013Pistacia veraAnanas comosus55.2672.2983.421140forward
CNT30716337Pistacia veraMalus domestica golden51.7786.283.91068forward
CNT30622816Pistacia veraDaucus carota55.3660.7482.41142forward
CNT30595734Pistacia veraOryza meridionalis43.4371.9185.16896forward
CNT30355893Pistacia veraLactuca sativa55.3668.8883.271142forward
CNT30704857Pistacia veraPrunus avium55.2672.283.861140forward
CNT3032244Pistacia veraTheobroma cacao44.2179.3784.43912forward
CNT30324534Pistacia veraAsparagus officinalis51.3382.882.811059forward
CNT30120658Pistacia veraCitrus clementina44.491.0587.34916forward
CNT30595410Pistacia veraEragrostis curvula54.3482.1883.411121forward
CNT30174705Pistacia veraVigna angularis39.9953.3386.3825forward
CNT30111644Pistacia veraFicus carica55.2179.9381.831139forward
CNT3050995Pistacia veraCucumis sativus52.0696.583.051074forward
CNT30114596Pistacia veraEutrema salsugineum44.1688.1983.32911forward

Expression of CNT30169882

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 2 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

Sequence

>CNT30169882
GGGATGGTCATACATAACTAACTTATTTTGCAATTACCTTCTTTCAAGTTTAATTCTATCCTGTACTAATTGGAAACCAATTGAGTAACACCTCCCTTGT
AGGGACCTAATTTTCTCCATCTAACTTTACTAAAGCCATAATACTCTGCAATGATTTTCCTCATCTAAATATGCGAAAGCCATAAATACTGTTAGGCACC
GTACTCTTAATCAAACGAAGCCCACATTTTGAATCATATATAAACCACGAAAGCATTGCGAAAACCAACATTTAAAAGAAGAGAATGTTGGGCAGGTGGA
CTTGATGAAAACACAAAACATCCGGCTTCAAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACT
GCACACTTGACTTGACAGCAATCAGAGAACCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCT
ACCCAACAGATAGAAGGGTTTTCTTCATCTTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAAC
ACTTTTTAACTGAACCGTTCAACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACT
GAAACTGGTCTCAACTTCATGACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCA
CTTAGAATTCACCACCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCC
AGCGAAGATAAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTT
ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATACCTCCACGAAGCCTCAGCACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCA
AGGTTCGTCCGTCTTCTAATTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGAATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTATCGAT
GGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGGTGAAGGGTT
GACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGT
CTTGGATCTTGGCCTTAACATTATCGATGGTGTCGGAGCTCTCCACCTCAAGAGTAATGGTCTTTCCCGTGAGGGTTTTAACGAAGATTTGCATGCCTCC
ACGCAGACGGAGGACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGC
TGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATCGTGTCAGAACTCTCGACCTCAAGAGTGATAGTCTTGCCGGTGA
GAGTCTTAACGAAGATCTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTC
AAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCG
ACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAGAAGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTA
GAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGCCGACTTG