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Detailed information on CNT30169881


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 6e-153

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728104Pistacia veraCorchorus capsularis42.553.486.24683forward
CNT3031515Pistacia veraTheobroma cacao42.573.685.65683forward

Expression of CNT30169881

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTRWSVDSFWML*

>peptide 2 (79 aa)
MESRLLLNVIVGQGTAVFKLLSGKDQTLLVRWDPLLVLDLGLNIIDGVGALHLKSNGLSREGFNEDLHASTQTEDKMEC*

Sequence

>CNT30169881
GGGATGGTCATACATAACTAACTTATTTTGCAATTACCTTCTTTCAAGTTTAATTCTATCCTGTACTAATTGGAAACCAATTGAGTAACACCTCCCTTGT
AGGGACCTAATTTTCTCCATCTAACTTTACTAAAGCCATAATACTCTGCAATGATTTTCCTCATCTAAATATGCGAAAGCCATAAATACTGTTAGGCACC
GTACTCTTAATCAAACGAAGCCCACATTTTGAATCATATATAAACCACGAAAGCATTGCGAAAACCAACATTTAAAAGAAGAGAATGTTGGGCAGGTGGA
CTTGATGAAAACACAAAACATCCGGCTTCAAGATCCGATGGGAGGAAGCACATTTTTATAGATAGAATCACGACAAAGCCCTTGCTGCCTAGGAAGCACT
GCACACTTGACTTGACAGCAATCAGAGAACCAAATAGAATTACACTCAGCGCAGATGAACTATACCTTCATACGTCCCCCACAAAGAATACAGTAGAGCT
ACCCAACAGATAGAAGGGTTTTCTTCATCTTCCGTATTCAAATCAATACACTTCAACTTCACTTATAATATCAAGTTATCAACCAACACAAGATTAAAAC
ACTTTTTAACTGAACCGTTCAACCGAGAAACTATTATTATTATTCCAAAGCAAAGAAAAACACAAGACAAAGACAGCTATTAAATAACGGAAACGAAACT
GAAACTGGTCTCAACTTCATGACCAGGAAATACTGGTAAACTCCAGACAGACACACAGACAGACAGGCAGAGAAACCACACCACCACCATCCAATTTTCA
CTTAGAATTCACCACCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAGGGTACGCCCATCCTCCAGCTGCTTCCC
AGCGAAGATAAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATCGTATCAGAACTCTCCACCTCCAGAGTT
ATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATACCTCCACGAAGCCTCAGCACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAGTCGGCCA
AGGTACGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTATCGAT
GGTGTCGGAGCTCTCCACCTCAAGAGTAATGGTCTTTCCCGTGAGGGTTTTAACGAAGATTTGCATGCCTCCACGCAGACGGAGGACAAGATGGAGTGTT
GACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTGT
CTTGAATCTTGGCCTTGACGTTATCGATTGTATCGGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGTTGAG
AAGATTGTTGTTGAAACTTGAAATAGAGAAATAGAGGATTGCTAGAATAGAATTGTGAAGAAGAAAGGGGGAGGAAGGGTGTTTATATAAGAGAAAATGC
CGACTTG