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Detailed information on CNT30169587

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30518453	Pistacia vera	Juglans regia	53.28	50.88	80.76	317	reverse complement
CNT30730492	Pistacia vera	Corchorus capsularis	21.34	51.63	87.4	127	forward
CNT30606619	Pistacia vera	Gossypium raimondii	13.45	28.88	91.25	80	reverse complement
CNT30151877	Pistacia vera	Prunus persica	47.39	30.03	80.5	282	forward

Expression of CNT30169587

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQKENLFELVNSFDQKCIMQESIVRMILS*

>peptide 2 (43 aa)
MISCGFFFHPLFSIFYYLGMNDLLPQHPLFRSTTTLIFCWVVM*

>peptide 3 (32 aa)
MIQGKDKGSWNKEIPFSIVSIIRSESRLQKWI*

Sequence

>CNT30169587
TTCATTTGAAACAATGTGGTAGAAAGCAACATGCGACTTGAACGACATGATCAGCTGTGGATTTTTTTTCCATCCACTATTTTCTATTTTCTATTATCTA
GGAATGAATGACCTCTTGCCTCAACATCCTTTGTTCAGGTCTACTACAACCCTCATTTTTTGTTGGGTTGTAATGTAAATAGTATATGATGGAGCTCGAG
TAGAAAGTATTTATTCATTTCTTGGGGGTAAGGGTCTATGGTTAATACCAATTAATACGTTGGAACAAACTTCATAAGTATATTTTTGATATCGAAATTG
AAAGATCTGATTCGAACAATTTTTCAATGCAAAAGGAAAATCTTTTTGAATTGGTAAACTCTTTCGATCAAAAGTGTATCATGCAAGAATCAATTGTCCG
TATGATTCTTTCATAGACACAAAAAGGGGTTTGTTGCTACCATTTTTTAAAACGATTAAAGATCACTGAAGTAATGTCTAAACCCAATGATTCAAGGCAA
AGATAAAGGATCTTGGAACAAGGAAATACCATTTTCAATTGTCTCAATTATTAGATCAGAATCAAGACTCCAAAAATGGATTTGAAAGGAGACAA