Detailed information on CNT3016764


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Zea maysSetaria viridis26.5153.0290.6149forward
CNT30376889Zea maysArabidopsis thaliana28.654685.09161forward
CNT30379142Zea maysManihot esculenta26.5115.9581.88149forward
CNT30490956Zea maysOlea europaea19.5726.1984.55110forward
CNT30506119Zea maysNicotiana attenuata32.9246.3782.7185forward
CNT30193210Zea maysSecale cereale31.8583.6485.47179forward
CNT30559586Zea maysActinidia chinensis27.0518.8481.58152forward
CNT30341750Zea maysEragrostis tef28.1129.1587.97158forward
CNT30366570Zea maysSorghum bicolor57.8353.192325forward
CNT30410012Zea maysPapaver somniferum17.9726.5884.16101forward
CNT30150023Zea maysBrachypodium distachyon31.8523.8787.71179forward

Expression of CNT3016764

Peptides detected in this lncRNA

>peptide 1 (35 aa)
CSLEKSGCMDSSWGCLESMHVKGCTWLMKDCSSEM*

Sequence

>CNT3016764
CTGTAGCTTGGAGAAGTCTGGCTGTATGGACTCATCCTGGGGCTGCTTGGAGAGTATGCATGTGAAGGGCTGTACTTGGCTGATGAAGGATTGTAGCTCG
GAGATGTAGGACTGTAGCTCGGAGATGTAGGGCTGTAGCTCGGTGACGTTGGGCTGTATCCTGGTGATGTCGGGCTGTAGGAGGGAGAGGTAGGGCTGTA
TGAGGGGGAGGTAGGGCTGTATGAAGGGGACGTAGGGCTGTATGAAGGTGATGTAGGGCTATAAGATGGTGAAGTTGGGCTATAAACTGGTGAGGTGGGG
CTGTAGCTTGGTGATGTAGGACTATAGCTAGGAGATGTAGGGCTGTAGCTTGGTGATGTAGGGCTGTAGCTTGGTGATGTTGGGCTGTAGCTCGGAGATG
TGGGTGAGTACGATGGGCTGGTAGGCGAGTACGTCGGGCTGGTTGGGGAGTAATTCGGGCTTGTTGGACTGTAGGTGGGAGAGCCAGGAGTGTAAGACGG
TGAGGTGGGACTATAGCTTGGTGATGCAGGGCTATATGATGGAGAGAGAGGGCTATATCCTT