Detailed information on CNT30167253


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373597Pistacia veraArabidopsis thaliana22.2217.3682.41108forward
CNT30727223Pistacia veraCorchorus capsularis20.787.282.18101forward
CNT30612524Pistacia veraArabis alpina17.733.5984.8886forward
CNT30423736Pistacia veraPapaver somniferum21.412.7189.42104forward
CNT30113848Pistacia veraFicus carica20.1612.6982.6598forward

Expression of CNT30167253

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MDRPSRPSGCSRHSWVHRSSIESSTGQDVGAHNETNCNWGNCSQTAL

Sequence

>CNT30167253
ATTACAGAAGAACTAGGAATTAAATCATACAACCGAATAACACCCTGGCTTCAATAATCACACGGTAAAGCTAAACATTTCAGGGCAAAACAACAGCGGT
GATGGTGATGAAGATCATGATCATGATGATTGGAAAACAGATCAACGCTCATAAATTAAACACCAAATTTTAAAAATAGAAATAGAACCCCTCAAACAAA
TTAAATACACCAGGAAGAGAAAAAGCCGCGCGTGCCACCTTGATTTTTGCATACATGGCTTAGTACTCAGCGGTTGGCAGCTGCTCGTGTGAGCTGTTAA
TAAAGAAGAACTCGTACACGAGCCCAGCGAGCCCACCACCGACCAATGGACCGGCCCAGTAGACCCAGTGGTTGTTCCAGACACAGCTGGGTTCATCGAA
GCTCCATCGAAAGCTCCACCGGCCAAGATGTTGGCGCCCACAATGAAACCAATTGCAATTGGGGCAATTGTTCCCAAACTGCCCTT