Detailed information on CNT30166677


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597167Pistacia veraOryza meridionalis21.6314.5684.4490forward
CNT30354594Pistacia veraLactuca sativa21.6313.6687.7890forward
CNT30371436Pistacia veraOryza glumipatula21.6312.2883.3390forward
CNT30104555Pistacia veraOryza rufipogon21.6312.3584.4490forward

Expression of CNT30166677

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MVIKIKLFSEFSIFTISRIHWNHTCICPSLHTPTSDHQR*

Sequence

>CNT30166677
TATCTAATACCCAAATTTGATTCACATTTACGACATTGATCTCGTAATCTGTTCGAAAAATACAATTGCATTGAATGTTATAAGTCTATCGTTAGTTTTC
AATAAAGTCGATACTACCACCATTAATGTTCAGGGCACAAACCCAAAAACAAAAAGAAATACATTGTTGAAAGCACGAGGTTACTCAGCAAGAATGCAAA
GAAACATGATGGGGATATAAAAATGTCACGGCAAGAGAATTTCTAAACAAACAGATGTAAAATTCCATTAATAGAAAACTAGATACATGGTGATAAAGAT
AAAACTATTTTCAGAGTTTTCCATCTTCACCATTTCCAGAATACATTGGAACCACACTTGTATTTGTCCTTCCCTTCACACTCCAACTTCAGATCATCAG
AGATGAATGGCACTTT