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Detailed information on CNT30166212


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30541074Pistacia veraBrassica napus6.421.5787.8866reverse complement
CNT30235645Pistacia veraBrassica oleracea7.2724.4386.6775reverse complement
CNT30261535Pistacia veraBrassica rapa6.6922.788.4169reverse complement

Expression of CNT30166212

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MKNKSDGPCGINPLSHIETRWHRLVILPLQRSGRSRCSMKPPSRSAL*

>peptide 2 (37 aa)
MTLSQLMFYHLFAPTWITSSRCRARRFVLCCEMLINY*

Sequence

>CNT30166212
GGCCATGGAGATTTATTTTAACAATCTTTGAGTTTCATTTTACAATTTCTTAAATTCTTAAAGATATGATTTCTGTTTTTTGTTTTGTCCATTTTTTCAA
TAATAACACTTGATTGTTTGTTTTAGCAAGGAGTACTGACTTTTTTTTTTTTTTTAAATGCTTTTACATAATAAACACATATAATAAGTTTATTCACAAT
AAATATATTTAGAATGCTATTATCATATTATATGATAAATATATAATATGGTTCGGTTCGGTCCGGTTTATCAGGTTAAAGATTATTAACTCAAACTGAT
CTATTTAATTTTTTTTTTTAATTTGATTTAGTTTTATATTTTAGTATCCAAACTCTGCTTGATTCGGTATGGGTTTTTGGGTTCAATTTTTTGGCGCACC
CCTAATAGTTTAGAATTCTTGGTTCTTATATATAGAGATAAATAATAAAAAAAACAAACAAGAGACAAACTTTAAGTTTTAAAATAACAATAACATAAGT
TTCAATATGAAAAACAAAAGTGATGGTCCATGTGGGATCAACCCATTGAGCCATATTGAGACCCGTTGGCATCGGCTTGTTATCCTTCCACTGCAAAGAT
CGGGAAGAAGTCGCTGCTCTATGAAACCACCCTCACGCAGTGCCCTCTAACTCTAGAACCCATGTGGCTCTAGCCTTCGCAGGAGACTTAACTCAATGAC
ACTGAGCCAATTAATGTTCTATCACTTATTTGCCCCCACTTGGATAACAAGCTCACGTTGTCGAGCTCGGCGATTTGTGTTGTGTTGTGAGATGCTAATA
AATTATTGATAATAGATGTTTGTTGTCAACGTGGTATTCTAGATTTCTTTTTTCTTTTTTCTTTTTCTTAAGATAAATAATGGAAATATAAGGTTATAAG
AAGATAACCATTTACTAAATCCATTAAAAGTTCTAAAACAAATAGATAAATTCTAAACAATTATGAGATCTAACATTTAAATGACAATCAACAATTAAAT
CACAATTTAGAATATATATGTCAATACGGCAA