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Detailed information on CNT30165850


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 9e-157

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-95

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120554Pistacia veraCitrus clementina69.6572.0487.01693forward

Expression of CNT30165850

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTRCRVDSFWML*

>peptide 2 (41 aa)
MLDNGLRNHHRGDGAPGEGLTPSECCNQPEYGHPPAAFQRR*

Sequence

>CNT30165850
ACACCATGAATATTGATACTAAAATCTCATAATTATGCAGAGATAAGGAAGCTTGATAATTCAAGTCACTGATATATAACACATTGAAACCCAGAATATA
TTAAAAACCAGAGAAATTTATTGATAGATTAACTTAAATGTAAAGTTCTAATTGCCATATTAGGCATACTACAATCATATCAGCAATTCAATCACAACAA
CGACGCACTTGACAGACCACACACAAGACACAAACGACCCAACCAATCCACCATGCTAGACAACGGCCTTAGAAATCACCACCGCGGAGACGGAGCACCA
GGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGATCCGGTGGAAT
CCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATCGTATCGGAGCTCTCCACCTCCAACGTAATAGTCTTTCCGGTCAACGTCTTCACAAATATC
TGCATACCTCCCCTCAAACGCAGCACCAAATGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCCAGGGTCCTCCCATCCTCCAGTTGCTTTCCTGCAA
AAATCAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCTACCTCAAGAGTAATGGT
CTTTCCGGTGAGGGTTTTGACGAAAATCTGCATTCCTCCACGGAGACGGAGGACGAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAAAGTA
CGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGT
CGGAACTCTCGACCTCGAGAGTAATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATCTGAAACCATAAAAAATAGCACAAGCAAACAAAT