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Detailed information on CNT30165846


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274489Pistacia veraChenopodium quinoa74.0672.0685.15882forward
CNT3044330Pistacia veraPrunus dulcis76.1574.1684.79907forward
CNT30608664Pistacia veraGossypium raimondii76.6682.1884.12913forward
CNT30217467Pistacia veraKalanchoe fedtschenkoi56.4278.2385.57672forward
CNT30128346Pistacia veraCorymbia citriodora55.6771.3785.22663forward
CNT3050777Pistacia veraCucumis sativus71.0387.1384.63846forward

Expression of CNT30165846

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVSVLTKICIPPRRRRTRWRVDSFCML*

>peptide 2 (41 aa)
MLDNGLRNHHRGDGAPGEGLTPSECCNQPEYGHPPAAFQRR*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTRWSVDSFWML*

>peptide 4 (79 aa)
MERGLLLDVVVGQSSAVFELLAGKDQTLLVWWYPLLVLDLGLDVVDGVRALDLKSDGLSGECFDEDLHPSTKTEDKMEG*

Sequence

>CNT30165846
ACACCATGAATATTGATACTAAAATCTCATAATTATGCAGAGATAAGGAAGCTTGATAATTCAAGTCACTGATATATAACACATTGAAACCCAGAATATA
TTAAAAACCAGAGAAATTTATTGATAGATTAACTTAAATGTAAAGTTCTAATTGCCATATTAGGCATACTACAATCATATCAGCAATTCAATCACAACAA
CGACGCACTTGACAGACCACACACAAGACACAAACGACCCAACCAATCCACCATGCTAGACAACGGCCTTAGAAATCACCACCGCGGAGACGGAGCACCA
GGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGATCCGGTGGAAT
CCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATCGTATCGGAGCTCTCCACCTCCAACGTAATAGTCTTTCCGGTCAACGTCTTCACAAATATC
TGCATACCTCCCCTCAAACGCAGCACCAAATGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCCAGGGTCCTCCCATCCTCCAGTTGCTTTCCTGCAA
AAATCAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCTACCTCAAGAGTAATGGT
CTTTCCGGTGAGGGTTTTGACGAAAATCTGCATTCCTCCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTT
CGGCCGTCTTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGTATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGT
CAGAGCTCTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGTGTTTTGACGAAGATTTGCATCCCTCCACGAAGACGGAGGACAAGATGGAGGGTTGACTC
CTTCTGTATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGA
ATCTTTGCCTTGACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTAATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATCT