Detailed information on CNT30165771


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONATHT002216, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641813Pistacia veraNymphaea colorata89.4194.1692.181612reverse complement
CNT3048148Pistacia veraPrunus dulcis62.971.9593.121134reverse complement
CNT30650539Pistacia veraRosa chinensis56.9171.393.961026reverse complement
CNT30705847Pistacia veraPrunus avium62.972.7492.951134reverse complement
CNT3027140Pistacia veraPopulus trichocarpa56.4680.6794.61018reverse complement

Expression of CNT30165771

Peptides detected in this lncRNA

>peptide 1 (42 aa)
ELLPVLSNAKCHAWVRGLGLCLPKLCICPLTRTTIVVILISS*

>peptide 2 (47 aa)
MGGSAWSFLVGGVICLVNSVNERDLNMLTSYVEVTFCGQLLRGTMAA*

>peptide 3 (39 aa)
MCWTGLMRLLASSRNATWLILPVVICLSQRLSHACVSMN*

>peptide 4 (42 aa)
MHLLDKRSTQALPVALMIHDNSTDRTAIVPTTHHSNFCPINF*

>peptide 5 (33 aa)
MPTKDQWMLLLGLHWHLMRNQSLWVLGGVWSQG*

>peptide 6 (36 aa)
MITQRIARPSYRRRIIQISALSTFDGRIEAYHGGDG*

>peptide 7 (29 aa)
SYCPFSRMRNVMHGCGVSAFACPSYAFVP*

>peptide 8 (94 aa)
GAIARSLECEMSCMGAGSRPLLAQAMHLSLDTNDYRGHLDLIVAYVLDGTHAIVGVIKECYLVDPASSHMLVSKIKPCMCKYELIQIVKLRMAH*

>peptide 9 (52 aa)
MINKDSRGHSYFIVRGEILGFIKDKQLRKHLPRMFSLIKNERWGLEDDQILS*

Sequence

>CNT30165771
GGAGCTATTGCCCGTTCTCTCGAATGCGAAATGTCATGCATGGGTGCGGGGTCTCGGCCTTTGCTTGCCCAAGCTATGCATTTGTCCCTTGACACGAACG
ACTATCGTGGTCATCTTGATCTCATCGTAGCCTATGTGCTGGACGGGACTCATGCGATTGTTGGCGTCATCAAGGAATGCTACCTGGTTGATCCTGCCAG
TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGATTGTGAAACTGCGAATGGCTCATTAAATCAATTATAGTTTG
TTTGATGGTATTTGTTACTTGGATAACCTTAGTAATTCTAGAGCTAATACGTGCACCAAACCTCGACTTCTTGAAGGGATGCATTTATTAGATAAAAGGT
CGACGCAGGCTTTGCCCGTTGCTTTGATGATTCATGATAACTCAACGGATCGCACGGCCATCGTACCGACGACGCATCATTCAAATTTCTGCCCTATCAA
CTTTTGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGTGATGGAGAATTAGGGTTCGATTCCGAAGAGGGAGCCTGAGAAACAGCTACCACATCCA
AGGAAGGCAGCAGGCGCACAAATTACCCAATCCTGACACGAGGAGGTAGTGACAATAAATAACATTACCGGGCTCTTTGAGCTGGGTAATTGGAATGAGT
ACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCACGGTAATTCCAGCTCCAATAGCATATATTTAAGTTGTTATAGT
TAAAAAGCTCGTAGTTGGACCTTGGGTTGGCTCGTCCCTTCTGTCGGCGATGCGCTCCTAGCCTTAATTGGTCGGGTCGTGCCTCCAGCACTGTTACTTT
GAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACATCATAGGATTTCGGCCCTATTCTGTTGGCCTTCGGGATCGG
AGTAATGATTAACAAGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATAAAAGACAAACAACTGCGAAAGCATTTGCCA
AGGATGTTTTCATTAATCAAGAACGAACGTTGGGGGCTCGAAGACGATCAGATACTATCCTAGTCTCAACCATAAACGATGCCGACCAAGGATCAGTGGA
TGTTACTTTTAGGACTCCACTGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCTGGGGGGAGTATGGTCGCAAGGCTAAAAATTAAAGGAATTGACAGA
AGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACAGGGAAACTTACTAGGTCCAGACATAGTAAGGATTGACAGACTAAGAGCTCTTT
CTTGATTCTATGGGTGGTAGTGCATGGTCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAACATGCTAACTAGCT
ATGTGGAGGTGACCTTCTGTGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCTTTAGATGT
TCTGGGCCACACACGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAAGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAAAT
CATTGCAATTATTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTTGTATTGACTACGTCCTTGCCCTTTGTACACACCGCCTGTCGCTC
CTA