Detailed information on CNT30164816


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701275Pistacia veraQuercus lobata77.4527.3889.87158forward
CNT30379859Pistacia veraManihot esculenta76.9625.0888.54157forward
CNT30710762Pistacia veraGlycine max52.9431.7689.81108forward
CNT30592165Pistacia veraMusa acuminata34.3124.919070forward
CNT30172855Pistacia veraTrifolium pratense70.5917.5290.28144forward
CNT3059740Pistacia veraArabidopsis lyrata74.022183.44151forward
CNT30610520Pistacia veraGossypium raimondii74.5118.2588.82152forward
CNT3052558Pistacia veraAmborella trichopoda63.2431.3182.17129forward
CNT3038429Pistacia veraCucumis melo34.3122.089070forward
CNT30113199Pistacia veraFicus carica81.8638.389.82167forward
CNT30333083Pistacia veraCynara cardunculus55.8830.8985.09114forward
CNT30726195Pistacia veraLupinus angustifolius78.9227.0689.44161forward

Expression of CNT30164816

Peptides detected in this lncRNA

>peptide 1 (62 aa)
WREEKPEQGNVLPEQACCGNTTRVKGSECNSGFLMEAPVELLHCEHVADFAVFVGLRRYIAS*

Sequence

>CNT30164816
TGGAGGGAAGAGAAGCCTGAACAAGGGAATGTGCTCCCTGAACAAGCCTGTTGTGGCAATACAACCAGGGTAAAGGGAAGCGAATGCAATTCCGGTTTCC
TCATGGAAGCGCCTGTGGAACTCTTGCATTGTGAGCATGTTGCAGACTTTGCTGTCTTTGTTGGCCTTAGGAGGTACATTGCCAGCTAAGGTATTTGTGT
TTCC