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Detailed information on CNT30164425


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002426, E-value = 3e-97

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674307Pistacia veraSetaria viridis25.9711.8492.74482reverse complement
CNT30548493Pistacia veraIpomoea triloba36.5384.0191.74678forward
CNT30619472Pistacia veraSesamum indicum19.2355.7894.96357forward
CNT30405728Pistacia veraBeta vulgaris42.2469.3888.78784forward
CNT30201968Pistacia veraPisum sativum20.246.9394.93375reverse complement
CNT30181606Pistacia veraSecale cereale36.6940.0191.78681reverse complement
CNT30297416Pistacia veraTriticum aestivum36.6949.3191.63681reverse complement
CNT30221243Pistacia veraHordeum vulgare24.0320.784.75446reverse complement
CNT30592657Pistacia veraMusa acuminata36.6919.3485.02681reverse complement
CNT30544645Pistacia veraBrassica napus13.6922.7296.06254reverse complement
CNT30239187Pistacia veraBrassica oleracea17.1326.1594.03318reverse complement
CNT30510913Pistacia veraSolanum lycopersicum14.9837.3794.6278forward
CNT3079706Pistacia veraBrassica juncea16.9227.7995.86314reverse complement
CNT30681493Pistacia veraTriticum urartu36.6940.7191.63681reverse complement
CNT30371226Pistacia veraOryza glumipatula12.1879.384.51226reverse complement
CNT3038524Pistacia veraCucumis melo28.0255.0388.65520forward
CNT30104396Pistacia veraOryza rufipogon26.9446.5589.2500reverse complement
CNT30578338Pistacia veraOryza barthii12.1862.0983.63226reverse complement
CNT30726873Pistacia veraLupinus angustifolius16.6599.0495.15309reverse complement

Expression of CNT30164425

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MQDASGMIDRTEAKAASFPPYPSLCVGDIKRVHWKRMGTGSIYSMAKHPKHNCTLRRSLPRDRSIRWNR*

>peptide 2 (49 aa)
EAADDESAPLLLAMPYLVPRHGGGSVARHEHRAKGRLSNSSELPYLTTT*

>peptide 3 (38 aa)
MNAGLDHLEWCEPHAGRPECIVFRGIWSKGKTSWRPPD*

>peptide 4 (29 aa)
MNGGPTDPGFHERWRVLECLSRALAHTPG*

>peptide 5 (37 aa)
MEGFSPIIKGPMKVHEFMEKEGVSLYQKCQKVNLMNR*

Sequence

>CNT30164425
CGAAGCTGCTGACGACGAGTCGGCTCCTCTGTTGCTAGCTATGCCCTACTTGGTCCCTCGGCACGGTGGAGGTTCCGTAGCGCGTCATGAGCACCGGGCT
AAGGGGCGGTTGAGCAACTCAAGCGAACTGCCCTACCTTACTACAACATAGGGACAGAAGGGAGAAGGTTGTGAAGGTGGCCTTGTTATCCATACCTTCG
GTCGGATGAATGGAGGACCGACCGACCCGGGTTTTCATGAGCGTTGGCGGGTCCTGGAGTGCCTGTCAAGGGCGCTAGCGCATACCCCGGGGTGATCATC
ACCACCTACACCTCACATCTCAGCGTAGTGGAACGTGTAACCCACCTGCTGTCTCATTCAACTACATTTGTTCCTGTAATCTATAACCTAACAGAACGCA
GTAGCAAGGGACAACCTGCCCATACAGTGAGCAGGGGGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCGTGGTAGGCCT
GCGCCGGGTCATTTAACGGAAATGGAAGGCTTTTCCCCTATTATAAAAGGCCCTATGAAAGTGCATGAATTCATGGAAAAAGAGGGAGTGAGCCTATATC
AAAAATGTCAAAAAGTCAATTTAATGAATAGATAGAGTCAACGGTACGACAGACAGCGCTGCCTACACGCGAATTAGCTTCCGAGGTCGAGCAGTCTCAA
TTTCACTACAGGATTTGTGAATGAATGCTGGGTTAGACCACCTTGAATGGTGTGAGCCACATGCGGGGAGACCCGAATGTATAGTTTTTAGGGGGATCTG
GTCGAAAGGAAAGACTAGCTGGCGCCCACCCGACTAGAAGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTC
AGAGGGCGATCGTGGAGTCACTGAATGAAGTCCTCTGTTTCTTTCGGAGGTGCTGACCCGCAGCGAGGCAGAGATGACTAAGTGACATATGAAATATGGC
GACGACAACAGCATGTCGTAGAAAGAGATAACAGGTGGAGCCAACGACCCACTAAGACTAACGTATCTACAACTACATCCCCGAGCGGCAGTCAAACGGA
GGCGTGAATGCAAGATGCCAGCGGAATGATTGATCGGACAGAGGCTAAGGCTGCTTCCTTCCCACCGTATCCTTCCTTGTGTGTTGGAGATATAAAGCGA
GTGCACTGGAAAAGAATGGGAACTGGGTCGATCTATTCTATGGCGAAGCATCCGAAGCATAACTGCACACTCAGACGATCTTTGCCGAGAGATAGGAGCA
TTCGGTGGAACCGGTGAACTACACTTGCTTCTGGATAGATGTGTGGGACAGAGGGCTCGTGGTACCTACTACCCACCCTTCCTCCTCTGCTTTGAGAATC
GTGTGAACGGAGAGTGGGTAGAAGGGAAGGAGGTCCTCATACGGAGTCGAACACTTACTTGAGCAGTGCGGGAGACTGGGGAATGGGTCGAGTAAACTCC
CCTGGGGACGGAGAAAGAACAGACGAAGCTTTACTTAGATAGGGCTTTGATTGGTATTGATTTTTTCTTAGTGATTGGAAAGGAGGGCGCCTGGGGATGT
TATAGAAAGGGAAGGCAGAGGTAGTACTTCGAATGGAGAAGAGAGGTGGCTCAGCAGGGAAGGAATGGGAAATCGTCAAGGATGACTTCTTTGTTTTGTT
GGTGAAATGAAGGGCTAAATAGCTACCAGTGATTCTCTAAGCCGGTCTGGATTTCCAATGCCTCGAGAAACTGGTCAAGATAGATGACAGCGCCTTTTTC
CTCTCTTCCTTGCCGGGAGGGCTCTCTTATTGCCTTTACCTCCCGCCCGGCCTGGA