Detailed information on CNT30163195


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691007Pistacia veraOryza sativa48.531.6584.07113forward
CNT30677945Pistacia veraSetaria viridis48.57.4684.07113reverse complement
CNT30272397Pistacia veraChenopodium quinoa35.624.4989.1683forward
CNT3021516Pistacia veraCitrullus lanatus99.1412.5688.74231reverse complement
CNT30730658Pistacia veraCorchorus capsularis96.5728.6691.11225reverse complement
CNT30526646Pistacia veraPhaseolus vulgaris38.6312.7584.4490forward
CNT30492881Pistacia veraOlea europaea99.1435.8185.71231reverse complement
CNT30191576Pistacia veraSecale cereale48.528.8384.07113forward
CNT30297822Pistacia veraTriticum aestivum48.527.4384.07113forward
CNT30610477Pistacia veraGossypium raimondii33.4811.585.978reverse complement
CNT30684722Pistacia veraTriticum urartu48.510.5984.07113reverse complement
CNT30356763Pistacia veraLactuca sativa83.2635.7986.08194forward
CNT30644293Pistacia veraCannabis sativa36.4826.4885.8885reverse complement
CNT30319059Pistacia veraAsparagus officinalis86.2724.7283.08201reverse complement
CNT30101183Pistacia veraOryza rufipogon48.519.1584.07113reverse complement
CNT30723626Pistacia veraLupinus angustifolius49.792088.79116forward

Expression of CNT30163195

Peptides detected in this lncRNA

>peptide 1 (41 aa)
NALGGIGKELEWNNIDSYRYRRKGSLLIQMLYLWDRERGKN*

Sequence

>CNT30163195
GAATGCCTTGGGAGGTATCGGGAAGGAATTGGAATGGAATAATATCGATTCATATAGATACAGAAGAAAAGGTTCTCTATTGATTCAAATGTTGTACCTA
TGGGATAGAGAAAGAGGAAAAAACTGAAGATTTCACATAGTACTTTTGGTCAAAAAATCAATCCGATTTATTTTGTGCCCTTCGCTCAATGAGAAAATGG
ATTAGCTTCTCTAGGATCAAACCTATGGGAGAG