Detailed information on CNT3015969


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30474747Zea maysSaccharum spontaneum21.959.4685.8699forward

Expression of CNT3015969

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MVVGRICIGCLCSLLIGYAFRWPTFARWICLRGSTFSSLIGFCFYIIHHRTLNLTFHHCCFALTVSVGGGPITLVSASWQ*

Sequence

>CNT3015969
ATAATGGACTTCAAATGAATCATTTTCTTGTAGGTTGTAGCACAAGCTGTTGAAGTTGGAGCTCATACTGCTGCGACTTTGACAAATCAAATGGTTGTTG
GTAGAATATGTATAGGATGCCTTTGTTCATTGCTGATCGGTTATGCTTTTCGTTGGCCAACATTTGCAAGGTGGATTTGCTTGCGAGGTAGTACTTTCAG
CTCTTTAATCGGGTTCTGCTTTTATATCATCCACCATCGCACGTTGAATTTGACTTTTCATCATTGTTGCTTTGCCCTCACTGTCTCTGTTGGCGGTGGG
CCCATTACTTTGGTTTCTGCAAGTTGGCAGTGAATAGCAAGGGGGCGGAGAAGCCCGCCAAGGGAAGGAAGGGGAAGGTTGGCAAGGACCCTAGGAAGCC
CAAGATATCTCCAGATGTTTTCTACATGTTCATGTGAGATGTGACTTTTCA