Detailed information on CNT30159432


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044609Pistacia veraPrunus dulcis14.2549.5185.83254forward
CNT30220903Pistacia veraHordeum vulgare2.7524.0293.8849forward
CNT30608078Pistacia veraGossypium raimondii14.338.4683.53255forward
CNT3031669Pistacia veraTheobroma cacao12.7358.5181.06227forward

Expression of CNT30159432

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MKFVARLMCFEMRGRAFTRLGGVWLTRSRCGRLKVRI*

>peptide 2 (72 aa)
MMANVSQSHNPRFILTIQQTCVAVTGLMIQLLMLLRSVHHHQCSIIMMIFQMRRRNDRIRIRVRVCSAIRFG*

>peptide 3 (70 aa)
MEAEDEIFFIGGDLASFNGGAEVVHPTEAAALAAAEEASAFGESSPAAFAFFLDVVGEKLVFFRRPRPSL*

>peptide 4 (57 aa)
MQDLHASMELNFRKTSMVMPCSIEDHGQLLPNCHHLEAVTQLFNTIIHHLLVLILAK*

>peptide 5 (56 aa)
MKMPLTEIPNWLPAQTPLPKSKPKDQEAVQCSLLADYVVVVVATVMLGVVQQMHLH*

>peptide 6 (46 aa)
MLDFHDPILPLFHHISIHFVKKASSLSNGCCFPCTSFAAKWNTRGG*

>peptide 7 (46 aa)
MEFDWRLYLFLLIIYFVFVFYFCVFLFLLSVLCYCRNEVCSKVDVF*

>peptide 8 (43 aa)
MMKKMPYEDSPQPKKIDFDDHCYYLMACGFLDLSLDLSASYSV*

>peptide 9 (41 aa)
MVAVFRAQVLLPNGIQEEVNFASICKIFMHQWSLISGKHQW*

Sequence

>CNT30159432
TAAAGAATAATTTCTTTTCACTGCTACATACCTAGAATCTTTCTTCATCTCTTTTCATTTCTTCTCTCCCACACCCCCTCCTCCATCCACACCACACCAC
ACCACACGCCCGCACCCCCCCCTCTCTCTTTCTATACCCATATCTCTTTTTTCACTTCATTTTAAGATTACAATGCTAGATTTTCATGACCCCATTTTAC
CATTGTTTCATCATATTTCAATACATTTTGTGAAAAAAGCTTCAAGTTTATCAAATGGTTGCTGTTTTCCGTGCACAAGTTTTGCTGCCAAATGGAATAC
AAGAGGAGGTTAATTTTGCTTCCATATGCAAGATCTTCATGCATCAATGGAGCTTAATTTCCGGAAAACATCAATGGTGATGCCGTGTTCCATTGAAGAT
CACGGTCAGCTGCTGCCAAATTGTCATCACTTGGAAGCAGTGACGCAGCTATTCAACACGATCATTCACCACCTTCTTGTGCTCATTCTGGCTAAATGAA
GATGCCATTAACGGAGATTCCCAACTGGCTCCCAGCCCAAACGCCGTTGCCGAAATCGAAACCAAAGGATCAGGAAGCTGTGCAGTGTTCCCTGTTGGCT
GATTATGTTGTTGTTGTTGTTGCAACTGTAATGCTTGGTGTTGTGCAGCAAATGCATCTTCATTGATCAATGAATTGAGAAACGAAGACAAAACGTCGTC
GCTACAGTAATTAATATCTTCATCTTCTTCATTGTGATGATGGCCAATGTTTCTCAATCCCACAACCCTAGATTCATCCTCACCATTCAGCAAACCTGTG
TAGCCGTTACCGGTCTCATGATCCAGCTGCTGATGCTGCTGAGAAGTGTTCATCATCATCAATGTAGTATCATTATGATGATCTTCCAAATGCGAAGAAG
AAATGACAGGATTAGAATTAGGGTTAGGGTTTGTTCTGCGATTCGCTTTGGATGATGAAGAAGATGCCTTATGAGGATTCGCCTCAGCCGAAGAAGATTG
ATTTTGATGATCATTGTTATTACTTAATGGCTTGTGGGTTCTTGGATCTATCCCTTGACTTATCAGCTTCTTACTCAGTATAATTACCGGTTGCCGAGAA
GGCGATGGAGGCGGAGGATGAGATCTTCTTCATCGGGGGCGATCTGGCCTCGTTTAACGGAGGGGCGGAGGTAGTTCATCCAACGGAGGCGGCAGCTCTT
GCCGCAGCGGAGGAGGCCAGCGCGTTTGGGGAGAGTTCGCCAGCGGCCTTCGCCTTCTTTCTTGATGTAGTTGGAGAGAAGCTCGTCTTCTTCCGGCGTC
CAAGGCCCTCTCTTTAACCCTACCTTGCTGCAACACGGAGTTTTAGTTGTGGTGGTGGTGGTGGAGGAGGTGGCCGCAGCAGCCGCTGATGCTGACGTGG
ATGGTTTCCTCATGTTTAGCCTCTTTGAAGATTTTGGATTGGATCGATGGATGGATCTTGAAAATGTGAAATGCTTTGAGTCGAGTTGAGTCGAGTTTGA
GTTGTGTTTGAGAGCTGATGGAATTTGATTGGCGGCTTTATCTTTTTCTTTTGATAATTTATTTTGTTTTTGTTTTTTATTTTTGTGTGTTTTTGTTTTT
ATTGTCGGTTTTGTGTTATTGTCGCAATGAAGTTTGTAGCAAGGTTGATGTGTTTTGAGATGAGGGGCCGTGCGTTCACGCGTTTGGGTGGAGTGTGGTT
GACGCGCTCAAGATGTGGAAGATTGAAAGTACGGATATAATTTATGGTGAGTATGTTGACACTTAATAACATATTGGGGAGAT