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Detailed information on CNT30158908


BLAST search results

BLAST vs Swiss-Prot:
sp|P51819|HSP83_IPONI, E-value = 0.0

BLAST vs NONCODE:
NONSLYT002404, E-value = 3e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Pistacia veraOryza sativa8.7535.6681.12143forward
CNT30675843Pistacia veraSetaria viridis9.6137.2986.62157forward
CNT30523296Pistacia veraSetaria italica7.8326.6781.25128forward
CNT30517898Pistacia veraJuglans regia28.9552.2781.82473forward
CNT30378101Pistacia veraArabidopsis thaliana17.3232.0981.27283forward
CNT3019970Pistacia veraCitrullus lanatus11.6962.8383.25191forward
CNT30729348Pistacia veraCorchorus capsularis42.7277.1385.1698forward
CNT3071729Pistacia veraQuercus suber16.5296.4383.7270forward
CNT30381694Pistacia veraManihot esculenta30.4280.1682.7497forward
CNT30402735Pistacia veraBeta vulgaris31.9538.3380.65522forward
CNT30526134Pistacia veraPhaseolus vulgaris29.3175.280.58479forward
CNT30630919Pistacia veraVigna unguiculata48.2359.1679.95788forward
CNT30711421Pistacia veraGlycine max10.2858.5483.93168forward
CNT3098657Pistacia veraSolanum tuberosum11.7532.8283.85192forward
CNT30187977Pistacia veraSecale cereale13.5330.6179.64221forward
CNT30305074Pistacia veraTriticum aestivum14.7538.4483.82241forward
CNT30394033Pistacia veraTriticum turgidum16.6520.180.51272forward
CNT30560521Pistacia veraActinidia chinensis15.1234.3582.59247forward
CNT30510227Pistacia veraSolanum lycopersicum18.4825.7981.13302forward
CNT30554909Pistacia veraOryza glaberrima10.8946.2382.58178forward
CNT30145759Pistacia veraMedicago truncatula9.340.1183.55152forward
CNT30314068Pistacia veraCamelina sativa45.1748.6879.4738forward
CNT3061941Pistacia veraArabidopsis lyrata4.3527.3187.3271forward
CNT3082269Pistacia veraBrassica juncea21.654.4879.32353forward
CNT30613762Pistacia veraArabis alpina12.485185.78204forward
CNT3013256Pistacia veraZea mays5.5122.9683.3390forward
CNT30606420Pistacia veraGossypium raimondii19.7756.5780.8323forward
CNT30652736Pistacia veraRosa chinensis20.5658.0380.36336forward
CNT30212676Pistacia veraHelianthus annuus20.9996.6283.97343forward
CNT30625469Pistacia veraDaucus carota41.2545.0580.56674forward
CNT30688537Pistacia veraTriticum urartu4.8334.286.0879forward
CNT30348495Pistacia veraEragrostis tef8.5746.9882.14140forward
CNT30477326Pistacia veraArabidopsis halleri18.9735.0784.19310forward
CNT30362691Pistacia veraSorghum bicolor24.4840.4481400forward
CNT30418103Pistacia veraPapaver somniferum9.3639.2386.27153forward
CNT30704690Pistacia veraPrunus avium45.2936.4282.16740forward
CNT3055928Pistacia veraAmborella trichopoda12.1822.6781.91199forward
CNT3022206Pistacia veraPopulus trichocarpa10.4731.4382.46171forward
CNT30323609Pistacia veraAsparagus officinalis44.3143.4879.42724forward
CNT30103468Pistacia veraOryza rufipogon10.8934.0382.58178forward
CNT30558289Pistacia veraPanicum hallii9.325.8981.58152forward
CNT30551470Pistacia veraOryza brachyantha14.0852.8783.04230forward
CNT30113681Pistacia veraFicus carica31.7671.2983.04519forward
CNT30724682Pistacia veraLupinus angustifolius14.0193.4786.03229forward

Expression of CNT30158908

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PHLHRVLALLWWPRPASYRHTPSIDQRHTHRWHPPCTALHIPSS*

>peptide 2 (57 aa)
MHFFTKFFLITLRILFCCNVSREMLSGRSSESTTPFTKLRYSGISSSQLSMMNTLLT*

>peptide 3 (32 aa)
MASTMYSTSYPFFLSFSRKGEFSTAFLLSPLM*

>peptide 4 (38 aa)
MLFIFFLVSKRSNGALLGTKRMALNSSCPSTEKCFTAR*

>peptide 5 (94 aa)
MGHFLNLLLTLLLFLLINFLHIPFLFLFGFLIFIVTNLFLSSLFSPEIDGVANKLGMLLHEVLQSPLLQVLQLQYLKKKNKFYQYQLINYTLRA*

Sequence

>CNT30158908
CCTCATCTTCATCGAGTTTTAGCCCTTCTTTGGTGGCCGAGACCAGCTTCTTACCGTCATACTCCTTCAATTGACCAACGGCATACTCATCGATGGCATC
CACCATGTACAGCACTTCATATCCCTTCTTCTTGAGCTTCTCCAGAAAGGGCGAGTTCTCAACAGCTTTCTTACTCTCACCACTGATGTAGTAGATATCC
TTTTGGCCCTCCTTCATCCTTGTAACATAGTCTTTCAGGCTGGTCATCTCGTCACCACTCTTGGTCGAGTAGAATCTGAGCAAGTCAGCAAGTTTTGCCC
TGTTCTGACTGTCTTCATGAATACCCAATTTCAGATTCTTTGAGAAGGCGTCATAAAATTTGTTGTAATCTTCTTTGTTCTCCGCTATCTCGTTGAACAT
CTCAATGCACTTTTTCACTAAGTTCTTCCTGATCACCTTGAGGATCTTGTTTTGTTGCAACGTTTCACGAGAAATGTTAAGTGGCAGATCATCTGAATCG
ACAACACCCTTTACAAAACTGAGATACTCTGGAATTAGCTCTTCACAGTTGTCCATGATGAACACCCTCCTCACATAAAGCTTGATGTTGTTCATCTTCT
TCCTTGTGTCAAAGAGATCAAATGGGGCTCTCCTAGGAACAAAAAGAATGGCCTTAAACTCAAGCTGCCCTTCCACAGAGAAGTGTTTCACAGCAAGGTG
ATCTTCCCAATCATTAGTGAGGCTCTTGTAGAAGGCTGCATACTCTTCCTTGGTAATCTCCTCAGGTTTTCGCAGCCAAATTGGTTTCTGTTTGTTGATT
AATTGCCACTCATGGGTCACTTCCTTAACCTTCTTCTTACCCTTCTTCTCTTTCTCCTCATCAACTTCCTCCACATCCCCTTCCTCTTCCTTTTTGGTTT
CCTCATCTTCATCGTCACTAACCTCTTTCTCAGTAGTCTTTTCAGTCCAGAGATAGATGGGGTAGCTAATAAACTCGGAATGCTTCTTCACGAGGTCCTT
CAATCTCCTCTCCTCCAAGTACTCCAACTACAGTATTTAAAGAAAAAAAACAAGTTTTATCAGTACCAACTCATCAACTACACTTTAAGAGCATAGTGCA
GAAAAAATGCATTGTATTTAACAGGGGAAAACACCAGAACAACATCATGCTCAAATTATAGGTCTAGCAAAATCTGTTTAACAAAACACAATATCTCTTA
ATCAACTAATTTACATCAAGGTGAAATACGTAGTTTGTCGTTGCATCATGAATATACACATTTAGATTTTGTGTTAAGAAGTAACACATCTGTAAATTCT
AGAAAGATAATTAAAAAGGTATCATACGAATAGTTCAGCATTTGCCATTGAAATTCTTACCTGATCCTCCTTGAGAAAGAGCGTGATCTTTGTTCCTCTG
CCCAGTGGTTCACCGTTAACATCCCTAGTAACAGTGAAAGACCCTCCAGCCTGAGACTCCCAAACATACTGTTCATCGTCATTATGTTTTGTTGTCACAA
TAACCTTCTCAGCCACTAAATATGCTGAGTAGAAACCAACACCAAACTGCCCAATCATGCTCACATCAGCACCCGCCTGTAACGCCTCCATAAACTCCTT
GGTCCCGGACCTCGCAATTGTTCCCAGATTGTTC