Detailed information on CNT30158473


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Pistacia veraOryza sativa27.981.9510061reverse complement
CNT30550263Pistacia veraIpomoea triloba34.860.6694.7476forward
CNT30637323Pistacia veraCapsicum annuum28.444.3996.7762forward
CNT3098505Pistacia veraSolanum tuberosum30.736.8394.0367reverse complement
CNT30304298Pistacia veraTriticum aestivum27.522.2710060reverse complement
CNT30221574Pistacia veraHordeum vulgare27.985.2910061reverse complement
CNT30400948Pistacia veraTriticum turgidum27.982.4410061reverse complement
CNT30585815Pistacia veraMusa acuminata22.021.9810048forward
CNT30440957Pistacia veraAegilops tauschii27.985.3910061reverse complement
CNT30314095Pistacia veraCamelina sativa23.853.4710052reverse complement
CNT30143344Pistacia veraLolium perenne27.982.7310061reverse complement
CNT30203140Pistacia veraHelianthus annuus27.529.1998.3360forward

Expression of CNT30158473

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKSSELRNKSEASRATSAHPFFSWLQIKA*

Sequence

>CNT30158473
GTAGGAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTGAATCCTTCGCGATGGAAATGCCCTCTTCCCCCAACCAACTAAGGGCAAGCACCTACTCC
TAACAAAATGAAAAGCAGCGAGCTCCGCAACAAAAGCGAAGCGAGCCGCGCTACTAGCGCGCATCCGTTTTTCAGCTGGCTTCAAATCAAAGCTTGACTA
ATAGGGAGTTGGAACCCT