Detailed information on CNT3015775


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067537Zea maysLeersia perrieri7.4866.192.82195forward

Expression of CNT3015775

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MYACSPGTLWGEHPSEQVGSIVQHLGRNI*

>peptide 2 (98 aa)
MDRSPRFGSISSDNRPMKTRFRYGSGGFHSLNQATAYESPAHSSTGTRSEITFPSGSSARFHVLFHYPLGVLFTFPSRYYFAIGHPGVFSLARWSFPC*

>peptide 3 (66 aa)
MKCKNRGRGGWSRLFFCLRAARLTKVPKAFTADTPTLESKPFEAPVVVAVGKAFVQLAPGSDLYDL*

>peptide 4 (64 aa)
MLPLHSRKEAKLISAIETNSFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLCLVSSKLHPGHG*

>peptide 5 (65 aa)
MLSFVDRFPSCCKDFARTVRGAIRQARANKAVRPYQIKNAKAFPSKGEKKRAMLLTDPFVLTSNQ*

>peptide 6 (51 aa)
MFQFARLSLACSWIQQAVQKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 7 (37 aa)
MEGIAYVNLPLLGWAIPSLRRGPISYLMVGVAICLAS*

>peptide 8 (79 aa)
MSRRLILQQARGQRSLSPPGAQHGFTFYFTTHWGFFSPFPHGTTSLSVTQEYLALQGGPFLADSHGIPRAPCYSGQSVS*

>peptide 9 (43 aa)
MLIFNSPKHFVACYALPRLWVPRYPPQAFPLLNLAINVKAMPS*

Sequence

>CNT3015775
TCGTGTAAGCACTCATGCTTCCACTTCACTCCAGAAAGGAAGCTAAGCTCATTTCTGCCATAGAAACAAACTCATTTCGGGGAGAACCAGCTAGCTCTGG
GTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTTTCATCCAAGCTTCATCCTGGT
CATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATCGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCATTCCCTTAACCAA
GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACTTTCCCCTCCGGGAGCTCAGCACGGTTTCACGTTCTATTTCACT
ACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTTCCTTGCTGATT
CACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTACTGGACTTTAGCCATCTAGGGTGCGGCACTCAACC
GCTTCGCCTAGCAGCACAACGCTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGTACGGGTAC
GGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCTCATGGATTCAGCAGGCAGTTCAAAAGGT
TGACCTATTTGGGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCC
ACCGCAAGCCTTTCCTCTTTTGAACCTCGCCATTAACGTTAAGGCTATGCCATCCTAAGGTGCTACTAAATGGAAGGATCTTATCAACGTCCATGAATGC
GAAATCATAGATCGAACTGACGAATTGGCAACCTTCGGTGCTATCATAGTATCCGCTAAGTTCACGGGCTGGAGATAAGCGGACTCGAACCGCTGACATC
CGCCACAGGGTAAACCACCGCCTCTCAGGCCTCCCCGACGGGTTCTACCATAGAGGACAACGATAGGCAATAACTCCCCCCCGAACACAGCTTACAACTT
TCATCGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCCCAAAACAAAAGGTGCTGAGTTGGAATCCCATTCTAAGGATTCTTGTGGTTCCGGGGC
GATCCAGTCACCCGGAGAAGATTTCTTTTCTTTGCTGATTCCTCTCAATGAAATTTGCCATGTTGCACTAAGTTACTTACGGATGTATGCATGCAGTCCG
GGAACACTTTGGGGTGAACACCCATCCGAACAAGTAGGGTCAATAGTTCAGCATTTAGGCCGTAACATTTAGCAAAAAACTAATCTTAAACCCAACAAGT
GCTCTCCGAACCAAGCTAGATAGTCTCCTATCACTAGGCTCACCAACCAACCTGGACTTTGATTCTTTCTTATTATTCTAACCGGATATAAAAACCATAA
GGATTGTTTCCAGCCAAGAGTTCCCATATGACATAAGCGCTCTTGGGTGGGCCCTCATTCGCCAGGTCTTTGAGTGCCCGTCGTACCACGTGGTTGGTAC
ACTAGGCTGATCGATACTTTACGATACTTAACTTAACTTTACGATACTTTGAGGATCTGGCACCTGCGCCCGACTCGGTCTGCCAGTGAATTTTGGCTCT
ACGTCCGGTCGTGCGTGGTATGTTCGCGATTCGTACAAATGGAAGGCATCGCGTACGTTAACCTTCCTTTATTGGGCTGGGCCATTCCATCTTTGAGAAG
GGGCCCAATCTCGTATTTGATGGTCGGCGTGGCAATATGCTTAGCTTCGTAGACAGGTTTCCCAGCTGTTGCAAAGACTTCGCGAGAACGGTCAGGGGCG
CGATTCGCCAAGCTAGGGCAAACAAAGCCGTCCGGCCCTACCAGATTAAGAATGCGAAGGCCTTTCCTTCGAAAGGAGAAAAAAAAAGAGCTATGCTATT
GACCGACCCTTTCGTACTTACTTCGAATCAATAGGCCTATCATTTTTCATGAGGCGGGCCAAATAGAGAATGAAATGCAAAAATAGGGGAAGGGGGGGAT
GGTCGCGCCTTTTCTTTTGTTTAAGGGCTGCTCGCCTTACTAAAGTACCAAAGGCTTTCACGGCTGACACCCCTACCTTAGAATCTAAGCCCTTTGAAGC
GCCAGTAGTTGTAGCAGTGGGTAAGGCTTTCGTTCAACTCGCTCCGGGTTCCGATCTATATGACCTCTAGACAGTACAAAGTACACCTCTTCCGTAGAGG
CAAGCTGGTAGTAACCTAACCTTTTAGAGTCGGGGGAGCCGAGCCCTTAACTCTATCAATAGATAAATCTTCGTGCGTGGCGTGAGTTGGAATCCTAGAA
AAGATCGATTGAGACTCCCTCCCCGGTTCCACGAAGATCTCTACGTACTTGTCTAGTCCAGGACAACTGAGATCTTCCGGTCTGCGTGCGTGGGAGCAGC
TGAAACAA