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Detailed information on CNT30157672


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 2e-156

BLAST vs NONCODE:
NONTPRT002153, E-value = 6e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500332Pistacia veraCoffea canephora64.6486.3683.76671forward
CNT30568721Pistacia veraActinidia chinensis66.8651.0385.01694forward
CNT30120609Pistacia veraCitrus clementina66.7682.8986.58693forward
CNT30176450Pistacia veraVigna angularis41.8139.4587.1434forward
CNT3050869Pistacia veraCucumis sativus59.5483.1884.95618forward

Expression of CNT30157672

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLDNGLRNHHRGDGAPGEGLTPSECCNQPEYGHPPAAFQRR*

>peptide 2 (71 aa)
MERGLLLDVVVGQSTAVLELLSGEDQTLLVRWDPFLILNLCLDVVDGVGTLDLESNGLAGQSFHKDLHLKP*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTRWSVDSFWML*

Sequence

>CNT30157672
TCAAGTCACTGATATATAACACATTGAAACCCAGAATATATTAAAAACCAGAGAAATTTATTGATAGATTAACTTAAATGTAAAGTTCTAATTGCCATAT
TAGGCATACTACAATCATATCAGCAATTCAATCACAACAACGACGCACTTGACAGACCACACACAAGACACAAACGACCCAACCAATCCACCATGCTAGA
CAACGGCCTTAGAAATCACCACCGCGGAGACGGAGCACCAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGGCCATCCTCCAGCT
GCTTTCCAGCGAAGATAAGCCTCTGCTGATCCGGTGGAATCCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATCGTATCGGAGCTCTCCACCTC
CAACGTAATAGTCTTTCCGGTCAACGTCTTCACAAATATCTGCATACCTCCCCTCAAACGCAGCACCAAATGAAGTGTTGACTCCTTTTGGATGTTGTAA
TCCGCCAGGGTCCTCCCATCCTCCAGTTGCTTTCCTGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTAACGT
TGTCGATGGTGTCGGAGCTCTCTACCTCAAGAGTAATGGTCTTTCCGGTGAGGGTTTTGACGAAAATCTGCATTCCTCCACGGAGACGGAGGACGAGATG
GAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGTGGGATCCCT
TCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTAATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCA
TCTGAAACCATAAAAAATAGCACAAGCAAACAAATCAGAAACAAAGACAGAAAATAAAATAAAAAGATAAATTTAAAAGAAAATAAAGATAAATTACGTT
GAGAGGATTTGGAGCTAGCTTTTGAAAAACGAGAAAGG