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Detailed information on CNT30157652


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 9e-168

BLAST vs NONCODE:
NONMEST001181, E-value = 8e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120625Pistacia veraCitrus clementina51.4141.6788.13455forward

Expression of CNT30157652

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVIVFPVSVLTKICMPPRRRRTRWSVDSFWML*

>peptide 2 (71 aa)
MERGLLLDVVVGQSTAVLELLSGEDQTLLVRWDPFLILNLCLDVVDGVGTLDLESNGLAGQSFHKDLHLKP*

>peptide 3 (48 aa)
WNPLLVLNLCLHIINRIGALHLQRNSLSGQRLHKYLHTSPQTQHQMKC*

Sequence

>CNT30157652
GGTGGAATCCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATCGTATCGGAGCTCTCCACCTCCAACGTAATAGTCTTTCCGGTCAACGTCTTCA
CAAATATCTGCATACCTCCCCTCAAACGCAGCACCAAATGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCCAGGGTCCTCCCATCCTCCAGTTGCTT
TCCTGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTAACGGTTTTGACGAAAATCTGCATTCCTCCACGGAGA
CGGAGGACGAGGTGTAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAAAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGTCGCTGCTGGT
CCGGTGGGATTCCTTCCTTGTCTTGTATCTTGGCCTTGACGTTGTCGATGGTGTCGGAACTCTCAACCTCGAGAGTGATTGTCTTTCCGGTGAGTGTTTT
GACAAAGATTTGCATGCCTCCACGGAGACGGAGGACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGGCCGTCCTCGAGTTGC
TTTCCGGCGAAGATCAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAACTCTCGACCTCGA
GAGTAATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATCTGAAACCATAAAAAATAGCACAAGCAAACAAATCAGAAACAAAGACAGAAAATAAA
ATAAAAAGATAAATTTAAAAGAAAATAAAGATAAATTACGTTGAGAGGATTTGGAGCTAGCTTTTGAAAAACGAGAAAGGGGGAT