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Detailed information on CNT30157646


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Pistacia veraNymphaea colorata69.3751.7285.68915forward
CNT30622934Pistacia veraDaucus carota70.1359.2984.11925forward

Expression of CNT30157646

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRRTRWSVDSFWML*

>peptide 2 (41 aa)
MLDNGLRNHHRGDGAPGEGLTPSECCNQPEYGHPPAAFQRR*

>peptide 3 (79 aa)
MERGLLLDVVVGQSSAVFELLAGKDQTLLVWWYPLLVLDLGLDVVDGVRALDLKSDGLSGECFDEDLHPSTKTEDKMEG*

>peptide 4 (40 aa)
MVSELSTSRVMVFPVSVLTKICIPPRRRRTRWRVDSFCML*

Sequence

>CNT30157646
GAATATTGATACTAAAATCTCATAATTATGCAGAGATAAGGAAGCTTGATAATTCAAGTCACTGATATATAACACATTGAAACCCAGAATATATTAAAAA
CCAGAGAAATTTATTGATAGATTAACTTAAATGTAAAGTTCTAATTGCCATATTAGGCATACTACAATCATATCAGCAATTCAATCACAACAACGACGCA
CTTGACAGACCACACACAAGACACAAACGACCCAACCAATCCACCATGCTAGACAACGGCCTTAGAAATCACCACCGCGGAGACGGAGCACCAGGTGAAG
GGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATAAGCCTCTGCTGATCCGGTGGAATCCCCTCC
TTGTCCTGAATCTTTGCCTTCACATTATCAATCGTATCGGAGCTCTCCACCTCCAACGTAATAGTCTTTCCGGTCAACGTCTTCACAAATATCTGCATAC
CTCCCCTCAAACGCAGCACCAAATGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCCAGGGTCCTCCCATCCTCCAGTTGCTTTCCTGCAAAAATCAG
ACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCTACCTCAAGAGTAATGGTCTTTCCG
GTGAGGGTTTTGACGAAAATCTGCATTCCTCCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTTCGGCCGT
CTTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGTATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCT
CTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGTGTTTTGACGAAGATTTGCATCCCTCCACGAAGACGGAGGACAAGATGGAGGGTTGACTCCTTCTGT
ATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGAATCTTTG
CCTTGACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTAATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCATCTGAAACCATAAAAAATA
GCACAAGCAAACAAATCAGAAACAAAGACAGAAAATAAAATAAAAAGATAAATTTAAAAGAAAATAAAGATAAATTACGTTGAGAGGATTTGGAGCTAGC
TTTTGAAAAACGAGAAAGG