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Detailed information on CNT30157615


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000950, E-value = 2e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550219Pistacia veraIpomoea triloba63.2210.6996.12464forward
CNT30619000Pistacia veraSesamum indicum63.2215.1995.04464forward
CNT30490123Pistacia veraOlea europaea63.2226.6596.12464forward
CNT30505422Pistacia veraNicotiana attenuata63.2217.4495.91464forward
CNT30712732Pistacia veraGlycine max88.6947.1191.09651forward
CNT30569655Pistacia veraActinidia chinensis63.2213.0392.46464forward
CNT30592527Pistacia veraMusa acuminata25.7556.5996.83189forward
CNT30543279Pistacia veraBrassica napus76.4352.8294.65561forward
CNT30147386Pistacia veraMedicago truncatula63.2230.0995.47464forward
CNT3082633Pistacia veraBrassica juncea34.276.2992.83251forward
CNT30605266Pistacia veraGossypium raimondii63.2222.1796.12464forward
CNT30216578Pistacia veraKalanchoe fedtschenkoi63.914.0895.31469forward
CNT30207637Pistacia veraHelianthus annuus62.9423.6295.45462forward
CNT30628241Pistacia veraDaucus carota62.9417.1195.89462reverse complement
CNT30595572Pistacia veraOryza meridionalis37.0631.7493.75272forward
CNT30360996Pistacia veraLactuca sativa62.9431.6796.32462forward
CNT30434643Pistacia veraPapaver somniferum51.7751.0893.16380forward
CNT30571858Pistacia veraVitis vinifera63.3513.4295.48465reverse complement
CNT3038420Pistacia veraCucumis melo61.9931.8695.16455forward
CNT30577866Pistacia veraOryza barthii33.9215.2994.38249reverse complement
CNT30113381Pistacia veraFicus carica29.748.8894.04218reverse complement

Expression of CNT30157615

Peptides detected in this lncRNA

>peptide 1 (56 aa)
DPVSSSEREWIGGLKKNKDVLLEPQQSVHFFFARFHSICCGLDDGKTSKPLYLRFY*

>peptide 2 (54 aa)
MASGERPTKIGYSWFSAKSISVERMMSMARGRALNGLGWPHFALPTPRKLRIQA*

>peptide 3 (31 aa)
MYVAKYGDDLWLVVKGQPRSDIAGFPRNLFQ*

Sequence

>CNT30157615
GAGACCCCGTTAGTAGCAGCGAGCGAGAGTGGATTGGGGGTTTGAAGAAAAACAAAGACGTCTTGTTAGAGCCTCAACAAAGTGTTCACTTCTTTTTTGC
CAGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCCCCTTTACTTGAGATTCTATTAGTAAAGGGCGCAGTGAACTGTAATTGTG
AAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGTATTAAAGCGCACTCACTCTAACGTCTTACCTT
TTGCATGATGGGTCAGTGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCACTTTCTAGAGGTAGAATCTTATAGTTCTTCCTATTTGACCCG
AAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCATGTATGTGGCAAAATACGGGGATGACTTATGGCT
AGTGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATG
GGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAATACAAGCCTAGATAGTTTGTACAGAAAAACTTTTGGGGTGCTAAGATCCAAA
GTCGAGAGGGAAACAACCCAGATCATACGCTAAG