Detailed information on CNT30157118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30718107Pistacia veraMalus domestica golden6.4121.5386.0293forward
CNT30152079Pistacia veraPrunus persica6.4124.0387.193forward
CNT30570479Pistacia veraVitis vinifera7.5226.5986.24109forward
CNT3026892Pistacia veraPopulus trichocarpa14.8338.680.93215forward

Expression of CNT30157118

Peptides detected in this lncRNA

>peptide 1 (37 aa)
DCYCLGFCPIGTFQRNHMKTELIWKLGEVRELLYLNF*

>peptide 2 (40 aa)
MLMCNDLDTSSLEGSGSEATLVLWTFGSKSNRQLPKFIRV*

>peptide 3 (95 aa)
MELILTGSVVVIKWVWPWFYSNIDWLSFASCVHRYSSFANTNIGFPSGLSSINAHSFAFASNTHMGTTTLLSFSGIHIYSALSNVNRSASRLSFP*

>peptide 4 (48 aa)
MAGHQCNLQHKHTQNLIRQTQNSKRSSLLKTMQVLRSIRREMLGLARN*

>peptide 5 (65 aa)
RLLLLGLLSHRYLPKEPYENGIDLETWRGKRVAVFEFLVKCKFISVPTFMSFSKKKRATFGSSWS*

Sequence

>CNT30157118
CAGACTGCTACTGCTTGGGCTTTTGTCCCATCGGTACCTTCCAAAGGAACCATATGAAAACGGAATTGATTTGGAAACTTGGCGAGGTAAGAGAGTTGCT
GTATTTGAATTTTTAGTGAAGTGCAAGTTCATCTCTGTCCCGACTTTCATGTCCTTCTCCAAGAAGAAAAGAGCTACATTTGGGTCATCATGGAGTTGAT
CCTCACTGGCAGCGTAGTTGTAATCAAATGGGTTTGGCCCTGGTTTTACTCCAACATAGACTGGCTTTCCTTTGCCTCCTGTGTTCACAGATACTCCTCC
TTTGCCAACACTAACATTGGTTTTCCCTCCGGGCTTTCCAGTATTAACGCCCACTCCTTTGCCTTTGCCTCCAACACTCACATGGGTACCACCACCTTGC
TTTCCTTTTCCGGTATTCACATTTACTCCGCCCTTTCCAACGTTAACAGAAGTGCCTCCAGGCTTTCCTTTCCCTGAATCCACGTTTACACCACCCTTAC
CTACACCGACAGAGGTGCCTCCTGGCTTTCCTTTCCCAGCATCCACGTTGACACCGCCCTTCCCTACATCAACAGAGGTCCACGGAACAGAAAACTAGTT
TTCGATTTCCATGGAAATGATTCAAGAGAGAGCAGGATTCAAAATACTGACCAGGGTGTAGGAGATCTCTGACAGCTTTTGGCATTGGAGTATTCGGCAA
TACAGACTTCCAGTAAAGTTCCGGAGCCAGAGCAGCATGGCTGGCCACCAGTGCAACCTGCAACACAAACACACACAAAATCTCATTAGACAAACACAAA
ATTCTAAGAGAAGCTCTTTGCTGAAAACAATGCAAGTTCTAAGAAGCATACGGCGAGAAATGCTAGGATTGGCAAGAAACTAAACCCCATTTAGACTTGA
AGCTACTCAACACAAAGCTGTTGGTTAAGAGAGAATATGAGCTGAAACCTATGCTTTACTTGTTAGGAAATAGCAACTGGGGTGCAACATTTATAATAGG
AGAAAGGATGAACAGCACCGTACCACCACCATGAGCAGCTGGTTTAATTATCTTTCAACTGTCCCTGGCTGAATTAATTGCAAGATTACTCAAGTAGACA
GGTGGTAGGGTAATAGAGTTCAATTTCATTTTGGAAATACCCTCTGATAAAAAAAAATATGAAAACAAAAACTACTCTTTGAATAGCTACTTGCTTGTAC
GTCTTGTCATTCAATGTTGATGTGTAATGATCTAGATACTTCAAGCTTGGAAGGGAGTGGCAGTGAAGCAACTTTAGTTTTGTGGACTTTTGGATCAAAA
TCAAACAGACAGTTGCCCAAATTTATTAGGGTTTAGTAGAGGTTGAGAGTTGTTATCTTTCATTCATTTTTGGTACTGTCATATCATACCATGAATCTCT
CTACTTGCATTTCAATCTTCTCCTCCATATGTATATGGGAGATGGTAGTT