Detailed information on CNT30157112


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516848Pistacia veraJuglans regia24.1821.2986.4696forward
CNT30381084Pistacia veraManihot esculenta50.6319.1682.59201forward
CNT30120150Pistacia veraCitrus clementina52.934.2680.48210forward

Expression of CNT30157112

Peptides detected in this lncRNA

>peptide 1 (91 aa)
PDFHVLLQEEKSYIWVIMELILTGSVVVIKWVWPWFYSNIDWLSFASCVHRYSSFANTNIGFPSGLSSINAHSFAFASNTHMGTTTLLSFP*

>peptide 2 (57 aa)
RLSCPSPRRKELHLGHHGVDPHWQRSCNQMGLALVLLQHRLAFLCLLCSQILLLCQH*

Sequence

>CNT30157112
CCCGACTTTCATGTCCTTCTCCAAGAAGAAAAGAGCTACATTTGGGTCATCATGGAGTTGATCCTCACTGGCAGCGTAGTTGTAATCAAATGGGTTTGGC
CCTGGTTTTACTCCAACATAGACTGGCTTTCCTTTGCCTCCTGTGTTCACAGATACTCCTCCTTTGCCAACACTAACATTGGTTTTCCCTCCGGGCTTTC
CAGTATTAACGCCCACTCCTTTGCCTTTGCCTCCAACACTCACATGGGTACCACCACCTTGCTTTCCTTTCCCTGAATCCACGTTTACACCACCCTTACC
TACACCGACAGAGGTGCCTCCTGGCTTTCCTTTCCCAGCATCCACGTTGACACCGCCCTTCCCTACATCAACAGAGGTACCTTTCTCTTCCAGCAAG