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Detailed information on CNT30156864


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT003033, E-value = 8e-168

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Pistacia veraOryza sativa24.1373.894.08355reverse complement
CNT30671914Pistacia veraSetaria viridis24.1321.3594.93355reverse complement
CNT30641383Pistacia veraNymphaea colorata24.2711.4392.16357reverse complement
CNT30378673Pistacia veraArabidopsis thaliana17.5420.6995.74258forward
CNT30389404Pistacia veraTriticum turgidum24.1324.5395.49355forward
CNT30569654Pistacia veraActinidia chinensis24.3410.2395.25358reverse complement
CNT30234026Pistacia veraBrassica oleracea23.1885.8992.08341forward
CNT30555751Pistacia veraOryza glaberrima10.0620.7697.97148forward
CNT30438073Pistacia veraAegilops tauschii23.7342.8795.7349reverse complement
CNT30258698Pistacia veraAvena sativa23.2542.3394.74342forward
CNT3061148Pistacia veraArabidopsis lyrata9.4555.8289.93139reverse complement
CNT30688989Pistacia veraTriticum urartu24.1318.0595.77355reverse complement
CNT30721163Pistacia veraTriticum spelta24.1334.4395.49355reverse complement
CNT30363124Pistacia veraSorghum bicolor11.2873.1386.14166reverse complement
CNT30429739Pistacia veraPapaver somniferum24.3411.1389.11358reverse complement
CNT30106724Pistacia veraOryza longistaminata24.1339.9395.49355reverse complement

Expression of CNT30156864

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MQRDKEKNQWRTTKSNNFYLFVPFCHRSLLGRFVSHPKKSIEKGQADMFYEMISGLIYAMPCIVFVCVY*

>peptide 2 (59 aa)
MSLNAMLNVRPTLHYVVTYAGKASVGPRNGKRIRCLPKRKRPLRKRKGDKKKNRLGINR*

>peptide 3 (33 aa)
MLEGFVLGLVLLTKIPFFKREGRPLPIWRCTPI*

>peptide 4 (36 aa)
MLCPASCSCVFIELSSLQRHALCFALYRRERSLSWS*

>peptide 5 (37 aa)
MNRQAWFCSQSNFVTFVYPSDGNPFGGSLGTDSLCVD*

>peptide 6 (41 aa)
MRFASLFIEERDRCLGLESEKQAQAIERIVPRSFTRTTRKW*

>peptide 7 (57 aa)
MIGIVYNHRQMKDFLKILRSTSTCPPIFMEPDKRMAHHATTQRILSYSFFFGGRSTV*

Sequence

>CNT30156864
ATAAGAGTGAACTCTCAGTATCCACACAAGCAAAAATGATGCATAATTTTCCTTCAAGAAAAATTCTCTTCTCCACCAAGTGAAAAACGTGAGAGAGAGT
GAGGTGAGTGGCTGGCTAATCATACGCAGCAGGCTCAAAGACCCCTGGTTCTGGAAGGCACATGAGTCTGAACGCTATGTTGAATGTGCGACCGACACTA
CACTACGTAGTTACCTATGCAGGTAAGGCGTCGGTCGGTCCTAGAAATGGCAAAAGGATTAGATGTCTCCCCAAAAGAAAAAGACCTTTAAGAAAAAGAA
AAGGGGATAAAAAAAAGAATAGGCTAGGCATAAATCGATAGGCTAAAATAAGAAATAAGGGCCAATGAGATAGAAATAATGAATCGAAACATAGAGTTCA
TGTTCGAATTCCATAGATAATATGATTGGTATTGTCTATAATCATAGACAAATGAAAGACTTTCTCAAGATTTTGAGATCAACTTCGACCTGCCCTCCAA
TCTTTATGGAGCCTGATAAAAGAATGGCACATCATGCCACTACCCAAAGGATATTATCATATTCTTTTTTCTTCGGAGGAAGATCTACGGTATGAACAGA
CAGGCATGGTTCTGTAGTCAAAGCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAACCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAG
ATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTTCTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGT
GTTGTCACCAAAACCTTCCACGATTGATAGAACATCCTGCTACTAACACTTGAAAAAGTTGTTTTCAAGGTCTCATCGCTTCGGTGAATCACTTGAGCCC
TGATACATTTTCGGTGCCATGGAGCCAGACCAGTGAGCTATTACGTTTTCTTCAGAAGCCACGCTTTGTTGTTGATGGTCATATCGAAAAAGGTTCTAAT
AACTTATGTTAGAAGGGTTTGTCCTCGGTCTTGTTCTCCTAACTAAGATTCCATTCTTCAAAAGAGAAGGTCGGCCCTTGCCCATCTGGAGGTGCACACC
CATTTAGGAACATATGCAAAGGGATAAAGAGAAAAATCAATGGAGAACTACCAAATCCAATAACTTTTATTTATTCGTACCATTCTGTCATCGATCACTG
CTGGGTCGGTTTGTAAGTCACCCAAAAAAAAGCATCGAGAAAGGTCAAGCAGATATGTTTTATGAAATGATCAGCGGTCTCATTTATGCTATGCCCTGCA
TCGTGTTCGTGTGTGTTTATTGAGCTTTCTTCACTTCAGCGCCATGCGCTTTGCTTCGCTCTTTATAGAAGAGAGAGATCGTTGTCTTGGTCTTGAGAGT
GAAAAGCAAGCGCAAGCGATAGAAAGGATAGTCCCTCGCTCGTTCACGCGAACTACTCGAAAATGGTGAGA