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Detailed information on CNT30156595


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39752|CALM_FAGSY, E-value = 4e-48

BLAST vs NONCODE:
NONSLYT003545, E-value = 1e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379145Pistacia veraManihot esculenta31.0554.4484.08245forward
CNT30487677Pistacia veraOlea europaea18.1239.3986.01143forward
CNT30234205Pistacia veraBrassica oleracea23.736.0383.96187forward
CNT3080440Pistacia veraBrassica juncea23.734.3185.56187forward
CNT30496859Pistacia veraDigitaria exilis23.1929.8584.7183forward
CNT30116198Pistacia veraOryza nivara26.7415.9879.62211forward
CNT30335796Pistacia veraCynara cardunculus22.1843.9786.29175forward

Expression of CNT30156595

Peptides detected in this lncRNA

>peptide 1 (31 aa)
YIHKTGSLMHPEVLRVIIKSLNKKFGYAQKL*

>peptide 2 (36 aa)
HTQNRFFDAPRSLKSYHKIVKQKIRICTEAIKANKK*

Sequence

>CNT30156595
TACATACACAAAACAGGTTCTTTGATGCACCCAGAAGTCTTAAGAGTTATCATAAAATCGTTAAACAAAAAATTCGGATATGCACAGAAGCTATAAAGGC
AAATAAGAAATAGCCAAGTAATTAACAGTGTCATTCATGCAACAGAAAACAATGTTCTGCAAGCTGGATTAGGTTCACAGATGGAAGTAAAATATGTAAA
AACTGAAAAGATACTCGAAAATATATATAACAACTAGGGATCCCATTATATTAGCCAACCCTATTTTCTCCAAATCTTTTTCAAAATGATTTCTTATAAG
ACGTTTTTGCGAGGGTGGGATCATTACTTGGCCATCATAACCTTGACAAACTCCTCATAATTTATTTGACCATCTCCGTCAACATCAGCTTCCCTGATCA
TCTCATCAACTTCTTCATCGGTAAGCTTCTCCCCCAGTTTGTCATCACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTATCGAATACC
CGGAAGGCTTCTTTAAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATCAGGTTAAGGACTCGGGGAAACAATGTGCCGTTACCTCAGCGTC
CACTTCATTAATCATCTTCCCTTATCATCTCATCCACTTCTTCATCAGTAAGCTTCTCCCCTAAGTTTGTCATCACAGGGCGCAGCTCAGCAGCTGAGAT
GAAACCATTCTGATCCTTATCGAATACCCGGAAGGCTTCTTTAAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATCAGGT