Detailed information on CNT30156283


BLAST search results

BLAST vs Swiss-Prot:
sp|P48386|CHS1_CAMSI, E-value = 3e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30330754Pistacia veraDioscorea rotundata25.4515.8885.7198forward

Expression of CNT30156283

Peptides detected in this lncRNA

>peptide 1 (42 aa)
AGPPGCAIQKIEFQSEIPNGLNASTKLFSMFFEISPGTSFKR*

>peptide 2 (76 aa)
MSINSPITVRQNCLSRRDYFKHWLLNSGNWIRTNDDSSCTITKQGLTHKTVKVGVTRTTESNSSNFGAHNKDTSTFV

Sequence

>CNT30156283
GCCGGTCCACCAGGGTGTGCAATCCAGAAAATTGAGTTCCAATCTGAGATACCCAATGGTTTGAATGCCTCAACCAAACTCTTCTCAATGTTCTTTGAAA
TAAGCCCGGGAACATCTTTCAAAAGGTGAAATGTAAGCCCAACTTCACGAAGATGTCCATCAATAGCCCCATCACTGTCAGGCAAAATTGTTTGAGCCGT
AGAGACTATTTCAAACATTGGCTTCTCAACTCCGGGAACTGGATCAGAACCAACGATGACAGCAGCTGCACCATCACCAAACAAGGCTTGACCCACAAGA
CTGTCAAGGTGGGTGTCACTAGGACCACGGAAAGTAACAGCAGTAATTTCGGAGCACACAACAAGGACACGAGCACCTTTGTTGT