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Detailed information on CNT30156273


BLAST search results

BLAST vs Swiss-Prot:
sp|P48386|CHS1_CAMSI, E-value = 1e-174

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3030385Pistacia veraTheobroma cacao22.5242.6186.47170forward

Expression of CNT30156273

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MSINSPITVRQNCLSRRDYFKHWLLNSGNWIRTNDDSSCTITKQGLTHKTVKVGVTRTTESNSSNF*

Sequence

>CNT30156273
CTAACTTCTCTTCCTTAAGGCCCAATTTGATTTCAACTTGATCCAATATTGCCGGACCACCAGGGTGTGCAATCCAGAAAAGTGAGTTCCAATCTGAGAT
ACCCAAAGGCTTGAATGCCTCAACCAAACTCTTCTCAATGTTCTTTGAAATAAGCCCGGGAACATCTTTCAAAAGGTGAAATGTAAGCCCAACTTCACGA
AGATGTCCATCAATAGCCCCATCACTGTCAGGCAAAATTGTTTGAGCCGTAGAGACTATTTCAAACATTGGCTTCTCAACTCCGGGAACTGGATCAGAAC
CAACGATGACAGCAGCTGCACCATCACCAAACAAGGCTTGACCCACAAGACTGTCAAGGTGGGTGTCACTAGGACCACGGAAAGTAACAGCAGTAATTTC
TGAGCAGACAACAAGGACACGAGCACCTTTGTTGTTCTCTGCTAAATCTTTGGCAAGGCGAAGAACCGTGCCACCGGCGAAGCAACCTTGTTGGTACATC
ATGTAACGCTTAACAGAAGGACGAAGACCCAAGAGCTTGGTGAGTTGGTAGTCAGCACCAGGCATGTCAACACCACTGGTGGTGCAAAACACCAAGTGGG
TGATTTTGGATTTGGGCTGACCCCATTCCTTAATAGCCTTGGTGGCTGCTTCTTTGCCTAGCTTTGGTACCTCAACCACCACCATATCTTGCCTGGCATC
CAATGAAGGCGCCATGTATTCACAAACACTTGGGTTTTCTTTCAAAATCTCCTCA