Detailed information on CNT30156270


BLAST search results

BLAST vs Swiss-Prot:
sp|P51080|CHS7_MEDSA, E-value = 3e-56

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381286Pistacia veraManihot esculenta65.0623.1282.86175forward
CNT30252573Pistacia veraAvena sativa29.748.828580forward
CNT30680228Pistacia veraTriticum urartu27.1415.4786.373forward

Expression of CNT30156270

Peptides detected in this lncRNA

>peptide 1 (83 aa)
LRNWIRTNDDSSCTITKQGLTHKTVKVGVTRTTESNSSNFGAHNKDTSTFVVLGQVFGKAKNRATSKAALLVHHVTFNRRTKA*

Sequence

>CNT30156270
AACTCCGGAACTGGATCAGAACCAACGATGACAGCAGCTGCACCATCACCAAACAAGGCTTGACCCACAAGACTGTCAAGGTGGGTGTCACTAGGACCAC
GGAAAGTAACAGCAGTAATTTCGGAGCACACAACAAGGACACGAGCACCTTTGTTGTTCTCGGCCAAGTCTTTGGCAAGGCGAAGAACCGTGCCACCAGC
AAAGCAGCCTTGTTGGTACATCATGTAACGTTTAACAGACGGACGAAGGCCTAAGAGCTTGGTGAGTTG